Nothobranchius furzeri (turquoise killifish): 107391690
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Entry
107391690 CDS
T05163
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107391690
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nfu04040
]
107391690
Ion channels [BR:
nfu04040
]
Ligand-gated channels
GABA-A
107391690
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
107391690
NCBI-ProteinID:
XP_015824591
UniProt:
A0A8C6P2J9
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Position
sgr16:10119759..10130968
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AA seq
451 aa
AA seq
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MGALKKSRPLSVLVWFFALWHTRSRADSNKTQNPKDIATFTKILDSLLDGYDIRLRPGLG
DRVTEVSTDIYVPSFGPVSDTDMEYTVDVFFRQSWEDERLKFHGPMDTLPLNNLMASKIW
TPDTFFHNGKKSVAHNMTMPNKLLRINEDGTLLYTMRLTVQVECPMHLEDFPMDSHSCPL
KFGSYAYTKTEVSYIWLRGASQSVVVAADGSRLNQYDLVGHSVGNETIKSSTGEYTVMTA
HFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARN
SLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSVVNDKKKEAAAVKR
NNAYAVAVANYAPNIMKDSALPTISKCSVSERGNAMAETKPEQNQKTFNSVSKIDRISRI
MFPVLFWTFNLVYWATYLNREPVMKDLVHAN
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgggggcactgaagaagtcccgtcctctgtcggtgttggtctggttcttcgctctgtgg
cacacacggtcaagagcagactctaataaaacacagaaccctaaggacattgcaacgttc
accaagatcctcgacagtcttctggacgggtacgacatcagactgaggcccggcctggga
gaccgagtgaccgaagtgtccacggacatctatgtgccgagctttgggccggtttctgac
acagacatggaatacaccgtagacgtcttcttccgccagagctgggaggatgagcgtctg
aagttccacgggccgatggacaccctgcctctcaacaacctgatggccagtaagatctgg
actcccgacaccttcttccacaacgggaagaagtcggtggcccacaacatgaccatgccc
aacaagcttctgaggatcaacgaggacgggacgctgctctacaccatgagactgacggtc
caggtggagtgtccgatgcatctggaggacttcccaatggattcccactcctgtccgcta
aagtttggaagctacgcctacaccaagacggaggtcagctacatctggctcagaggcgcc
tcccagtcggtggtcgtggcggccgacggatccagactcaaccagtacgacttagtggga
cactctgttgggaacgagaccattaaatccagcactggtgaatacaccgtcatgaccgct
cacttccacctgaagaggaagatcgggtactttgtgatccagacgtatctgccctgcatc
atgacggtcatcctctcccaggtctccttctggctcaatcgggagtcggtgccggccaga
accgttttcggtgtgaccacagttctcacaatgacgactctgagtatcagcgcccgtaac
tcgctgccgaaggtggcctacgccaccgccatggactggttcatcgctgtctgctacgcc
ttcgtcttctctgctctgattgagttcgccaccgttaactacttcaccaaacggggctgg
gcctgggacgggaagagcgtcgtcaacgacaagaaaaaggaggcggctgcggtcaagagg
aacaacgcctacgccgtggcggtggcgaactacgctcctaacatcatgaaggactcggcg
ctgcccaccatctctaagtgctctgtgagcgagcgtggaaacgccatggcagaaaccaaa
cctgagcagaaccaaaaaaccttcaacagcgtcagtaagatcgaccgcatctcccggatc
atgttcccggttctgttctggacctttaatctggtctactgggccacgtacctgaacaga
gaaccggtcatgaaggacctggttcacgctaactga
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