Nothobranchius furzeri (turquoise killifish): 107391919
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Entry
107391919 CDS
T05163
Symbol
snx6
Name
(RefSeq) sorting nexin-6 isoform X1
KO
K17920
sorting nexin-5/6/32
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107391919 (snx6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107391919 (snx6)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nfu04990
]
107391919 (snx6)
Membrane trafficking [BR:
nfu04131
]
Endocytosis
Macropinocytosis
Sorting nexins
107391919 (snx6)
Domain-containing proteins not elsewhere classified [BR:
nfu04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
107391919 (snx6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
FAN1_HTH
Motif
Other DBs
NCBI-GeneID:
107391919
NCBI-ProteinID:
XP_015824917
UniProt:
A0A1A8B3E7
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Position
sgr16:16939693..16947873
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AA seq
407 aa
AA seq
DB search
MMQEGLDDGPDFLSEEDRGPRAMNVDLEMDATLQVDISDALSERDKVKFTVHTKSTLPNF
KQNEFSVVRQHEEFIWLHDSFIENEDYAGYIIPPAPPRPDFDASREKLQKLGEGEGSMTK
EEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPVLRKDLNFHVFLEYNQDLSVRGKN
KKEKLEDFFKNVVKSADGVLVAGVKDVDDFFEHEKTFLLEYHNRVKDASAKCDRMIRSHK
NAADDMNRIASSLYTLGTQDSMDLCKFFLKVSELFDKTRKVEARVAADEDLKLADLLKYY
LRESQAAKDLLYRRSRALVDYENANKGLDKARAKNRDVLQAETSQQLCCHKFEKISESAK
QELIDFKTRRVAAFRKNLVELAELELKHAKGNLQLLQSCVGVLNSNT
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaggaagggctggacgacggacctgatttcctctccgaggaggacaggggaccc
cgagcaatgaacgttgatctggagatggatgctactctacaagtggacatctctgatgct
cttagcgagagggacaaggtgaagtttactgtccacaccaagagcactctcccaaacttc
aaacagaacgagttctctgtggtccgacagcatgaagagttcatctggctgcatgactcg
tttatcgaaaatgaagactacgcaggatacattatccctccagctcctcccaggccagat
tttgatgcatccagagagaagctgcagaagctcggggagggcgagggatccatgacgaag
gaggagttcactaaaatgaagcaggagctggaggcagagtacctggccatcttcaagaaa
actgttgccatgcacgaggtcttcctgtgtcgcgtggcggctcatcctgttctcaggaag
gacctcaacttccacgtctttttggaatacaaccaggatctgagcgtacgagggaagaac
aagaaggagaagctggaggatttctttaagaacgtggtgaagtcagccgatggggttcta
gtggctggagtcaaggatgtagacgacttctttgagcacgagaagacgtttctgttagaa
tatcacaacagagtcaaagatgcgtcggccaaatgtgacagaatgatccgttctcacaaa
aatgctgctgacgacatgaacagaatcgcctcctccctctacacactaggaacacaagac
tccatggacctctgcaagttcttcctgaaggtctcggagctgtttgacaaaacgaggaaa
gttgaagctcgggttgcagctgatgaagacctgaaactggctgacctgcttaaatattac
ctgagagagtctcaggctgcaaaggaccttctgtaccggagaagccgggctctggtggac
tatgagaacgctaacaaaggtctggataaagctcgagctaaaaaccgagacgttctgcag
gctgagaccagccaacagctctgctgccacaagtttgagaagatctcagagtctgccaag
caggagctcatagacttcaagaccagaagagtggcagcattcaggaagaacctggtggag
ctggcagaactggaacttaaacacgctaagggaaacctccagctgctgcagagctgcgtg
ggggtcctaaacagtaacacctaa
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