Nothobranchius furzeri (turquoise killifish): 107393800
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Entry
107393800 CDS
T05163
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107393800 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107393800 (ttc37)
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
107393800 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_16
TPR_14
TPR_17
TPR_19
TPR_11
TPR_8
TPR_12
TPR_CcmH_CycH
TPR_9
ANAPC3
ARM_TT21_N
PknG_TPR
TPR_COPA_B
Type_III_YscG
Fis1_TPR_C
HemY_N
TPR_15
HEAT_Nup120
COG4_N
Motif
Other DBs
NCBI-GeneID:
107393800
NCBI-ProteinID:
XP_015827898
UniProt:
A0A1A8VCX3
LinkDB
All DBs
Position
sgr18:17819513..17837856
Genome browser
AA seq
1570 aa
AA seq
DB search
MSNKEVKAALKSAKEAIKNKEYKEALKHCKVVLKLEKNNYNAWVFIGLAASELEQPDQSQ
AAYKKAVELEPEQLLAWQGLANLYEKADQWDFQVELPNVYQKLVELYARSDKNKCYEVIK
KLSDIYQSDREFLKLAKVWLQLVQLKEEDGVETKELVQLLQKMTQLLLDGLNGEQMDSET
QQHLITAFEKALRLTEPVPGEEHAKLSANYIRYLSELPHEETKMKEACRSMLSLYPNQTF
PLEALCSLYLKTDNVDEDAISCFSQLLKLAPNSGLGHLGLGVKAVRDGRYSDAISNLEQG
LKKRSSLTGWSSLAEVQFKMHRYSDCAASCSQGLSLCTPEEEKLRNKLLRIKVEALVRSG
GEKAADEALETFSQIPGADKDPVLLALKGRSFLNKGKIDQALKVLSELEASSPNVVQGSA
LRGLVHLAEGQLQLAEQSFLKAANQSPDSGEYYFLLGKVYWDMGADTQKDRSKAHTHLLK
AAKLDPHLGCAFRYLGHYYRKVVNDNGRAQGCYKKAFQLDSSDVESGAAAVDLSMDQGDM
DNALATLQSVIERATPGSAKWAWMRRGLYYLKIGEHQKATADLQAALRADPEDWVCWECL
GEAYLNRRSFTAAMKAFGKAHQLQPSSIYSLYQTAAIKQTLGKFKEAAAEYLQITRQQDY
VPALKGLGECQLSLAKGLMEDCRDGGAIDLIQLAIHNLCRAANLRPDLSCLWKLLGDCCT
AVSLVSPSRAAVVVPALLTGLDHSTQDRTLNQAQTLKVGERCYAHALRLMPKVASLWYDL
GLNYYRQATSRSYPMEEDQNSQTLNLGKAQQCFKNAIKMDSGNHSYWNALGVISMNKGLE
NCSLAQHCFIKSIQVEPNNVVAWTNLGALYLKKDNIELAHEAFKTAQSLEPLYVSCWIGQ
ALIAERVGSYDTMDLFRHTTELSTHMEGVKGYAYWVCSTLLDKNNRDAELYRYNIVQMNA
VSAAQVALSKYTERIQSDPDAFIKLGYLNERLQLKRQALKAYQRAVELLQSTSSPEELAF
SLSCYARALCNAGQWEEAVHVYNSTPLQDLSDLVGLALAYFRAGLFAESINAYERGLAVA
SNEKEKAYILTALAMLQHRQGNLDLAKTLLFKCSVLKEPISESLLCLCALGLVHSDATLA
AAALAELLKQGPASGSVVELQCLLTCSLLALQGNYSAVQREASRAVHRNPGNPSLWALLS
RVIPQHYPRKANGGAVAGHVACLASMTLGKRALLYSGVNLLASGRHSGEDAQRNALKMMQ
RAVLLCPDDPAAWAGLMAACHTENTSCYLTGCAPRRQSLEHSLMSAVSEKVRSMEEIEHP
LAQSLEGWVLQQAVTGLMLEGHLDQAEELCTQVLSVSPQHPAVMLSLRQVQCQRLLLTDG
GTVLPDPVLEQLNQAVAMNPTNLGAWHWLAEVYRSQGLLVQAVMAYRQSLQLSLQLGVHN
YQLASLLRLALLALRPSLAGVPGSDWKDLVMEATTEVLKLGSSPMALLFQALLQYVTKTG
ARETRRLLERLVYASSESVPVTVVQVASWYLLRHLQAKNDQELINVLLQHAKLNGNQRLL
QFHSHLTSSS
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atgtccaataaagaagtgaaggctgcactgaaaagtgccaaagaggcgattaagaataag
gaatataaggaggctttaaaacactgtaaggtcgttttgaaacttgaaaagaataattac
aatgcatgggtgttcatcggcttggcagccagtgagctggagcaaccagatcagtcccag
gctgcttataaaaaagctgtggagctggaaccagagcagctgctggcctggcagggtcta
gcaaatctttatgaaaaggcggatcaatgggatttccaagtcgagctgccaaacgtctac
caaaagcttgttgagctatatgcaaggtctgataaaaacaaatgttatgaggtgatcaaa
aaactgtccgatatttatcagtcggacagggaatttttaaagttggcaaaggtttggctg
cagcttgttcagctgaaggaggaagacggtgtggaaacgaaagaattagtgcagctgctg
cagaagatgacccagctcctcttagatggccttaatggggagcagatggacagtgaaact
caacagcatctcatcacagcttttgagaaggccttacgtctcactgagcctgtgcctgga
gaggagcacgcgaagctttcggctaactatattagatatctttctgaacttccacacgaa
gaaaccaaaatgaaagaggcgtgccgatctatgctgtccctctacccaaaccaaacattt
cctcttgaagctctttgttccctctacctcaaaaccgataatgtggatgaggatgcaatt
agctgcttttcccagctcctgaaactggctccgaatagtggactaggtcacttaggtttg
ggtgtcaaagcggttcgagatgggaggtatagcgacgccatcagtaacctggagcaagga
ctaaagaagaggagctcattaacaggatggagtagtctggctgaggttcagtttaaaatg
cacagatactctgattgtgctgcgtcgtgctcccaaggcttgagtctgtgtacgcctgaa
gaggagaaactgagaaacaaactgcttcgcataaaggtagaagcattagtgagaagtgga
ggagagaaggctgctgatgaggccttggagactttttcacagatcccaggagctgacaaa
gacccggtgctgctagccttgaaaggacgttcattccttaacaaagggaagattgatcaa
gccctcaaggtgttgtcagagctggaggcctccagcccaaacgtggttcagggatcggct
ctgagaggactggtacatttagcagaaggtcagctgcagctagcagagcagagtttcctg
aaagctgctaatcagagcccagacagtggagaatattacttcttgcttggaaaagtctac
tgggacatgggggcggacacacagaaggaccgaagcaaagctcacacgcacctgttaaag
gctgctaagttagatccacacctcggctgtgcgtttcgctacctggggcactattatagg
aaggtggtaaatgataatggtcgtgcacaaggctgctataagaaggcttttcagctggac
agcagtgatgtggagtctggagccgctgctgtggatctcagtatggatcagggggacatg
gacaatgctttagcgacacttcagtcagtgatagagagagctactcccggctcagctaag
tgggcttggatgagacgaggcctgtactatctgaagatcggagagcatcaaaaagccact
gctgatttgcaggcagctttgagagcagatccggaggactgggtgtgctgggaatgttta
ggtgaggcctatctaaaccggcggagcttcacagctgccatgaaggcctttggtaaggct
catcagcttcaacctagctccatctacagcctctaccagactgctgccatcaaacagact
ctgggcaagttcaaagaggcggcggcagagtacttacagatcacaagacaacaggactac
gttcctgctcttaaaggacttggggagtgccagctgtctctagcaaaaggtttaatggag
gactgcagagacggaggagccattgacctcattcagctagccatacacaacctctgcagg
gctgcgaacctgcgaccagacctgtcttgcttgtggaagcttctgggggattgttgtact
gccgtcagccttgtctcaccaagccgggctgcagttgtggtgccagccttactcacaggt
ttagaccacagcacacaagatcgcacactgaaccaggctcagactctcaaagttggcgaa
aggtgctatgctcatgctctgaggttgatgcccaaggttgccagtctttggtatgactta
ggcctcaactactaccgccaggccaccagccggtcttatcccatggaagaagaccagaat
tcccaaactctgaacttagggaaagcccagcagtgtttcaaaaatgccatcaagatggac
agtgggaaccacagctactggaatgccttgggagtgatctccatgaacaaaggtctggag
aactgttctctggctcagcattgcttcatcaagtcgattcaagttgagccgaacaatgta
gtcgcatggacgaaccttggagctctgtatttgaagaaggacaacatagagcttgcacac
gaggccttcaaaactgctcaatcgctggagccactttatgtcagctgctggatcggacag
gcgctgatcgcagaacgcgtgggaagctacgacaccatggatctgttcaggcacactact
gaactcagcacacacatggaaggtgtgaaaggctatgcctactgggtttgttccaccctg
ctggataagaacaaccgagatgctgaactgtaccggtacaacatcgttcagatgaatgca
gtctctgcagctcaagtggcgctcagcaaatatacagagagaattcagtctgaccctgat
gctttcatcaagctgggataccttaatgaacgcctgcagctgaagaggcaggccttaaag
gcgtaccaacgagctgttgaactgctgcagtccacatcctccccagaagagctagctttt
tctctcagctgctacgctcgtgctttatgtaacgcgggccagtgggaggaggcggtgcat
gtatataactccactccactgcaggacctcagtgatctggttggcctggctctggcctac
ttcagggcaggactcttcgctgaaagcatcaatgcctatgagcgaggcttggctgtggct
tctaacgagaaagaaaaggcatacatactgactgctctggccatgctgcagcaccgacaa
ggcaacctcgacctagccaagactctgctcttcaaatgctcggtgttaaaggagccaatc
tcagagtctctgctttgtttatgtgccctgggattggtccacagtgatgctacgctagct
gctgctgccctggcagagctgctgaaacagggtccagcctcggggagtgttgtggagctg
cagtgtctgctcacatgctccttgttggccctacagggcaattacagcgcggtacaacga
gaggcctccagagctgtacacagaaatcctggaaacccatccctctgggctcttctgtcc
agagtgataccacagcactaccctagaaaagcaaacggtggagcagtagctggtcatgtt
gcctgtcttgctagcatgaccctaggaaagagggcgctgttgtacagtggggtgaacctg
ctggccagtgggagacactcaggagaagatgctcagaggaatgctctgaagatgatgcag
agggctgttctgctctgtcctgatgatccagcagcttgggcgggattaatggcagcctgt
cacactgaaaacacgtcctgttatctcactggttgtgctcctcgccgacagtctctggag
cattccctcatgtctgcagtctctgaaaaagtgcgtagtatggaggagattgagcaccct
ctggcccagtctctggaaggctgggtattacagcaggctgtgaccggtctgatgctggag
ggtcacctggaccaggcagaggagctctgcacacaggttctcagcgtgtcacctcaacac
ccagctgtaatgctgtcactgagacaggttcagtgtcagcgcctcctactgactgatggt
ggtactgtcctcccagaccctgttctggagcagctcaaccaagctgtggccatgaaccct
actaaccttggagcatggcattggctggctgaggtgtatcgtagccagggcctgctggtt
caggccgtcatggcctacaggcagagcctgcagctctcccttcagcttggcgtgcacaac
taccagctcgccagcctcctgaggctcgctctgctcgctttacgaccctctttggcaggt
gtcccaggaagtgactggaaggatctggtgatggaagccactacagaggttttgaagctg
ggttcttcccccatggctctgctttttcaagccttgcttcagtatgtgaccaaaacgggt
gctagggaaacaaggcgcttgctggagagactggtgtacgcgtcttctgaaagcgttcca
gtgacagtggtgcaggtggcaagttggtacctcctcagacatctgcaggctaaaaatgac
caggaactcatcaacgtccttttgcaacatgctaaattgaatggaaatcaaagactgcta
cagtttcactctcatcttacgtcttcatcctga
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integrated database retrieval system
