Nothobranchius furzeri (turquoise killifish): 107393916
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Entry
107393916 CDS
T05163
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7 isoform X1
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03022
Basal transcription factors
nfu03420
Nucleotide excision repair
nfu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107393916 (cdk7)
09124 Replication and repair
03420 Nucleotide excision repair
107393916 (cdk7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
107393916 (cdk7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
nfu01001
]
107393916 (cdk7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfu03021
]
107393916 (cdk7)
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107393916 (cdk7)
03400 DNA repair and recombination proteins [BR:
nfu03400
]
107393916 (cdk7)
Enzymes [BR:
nfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
107393916 (cdk7)
2.7.11.23 [RNA-polymerase]-subunit kinase
107393916 (cdk7)
Protein kinases [BR:
nfu01001
]
Serine/threonine kinases: CMGC group
CDK family
107393916 (cdk7)
Transcription machinery [BR:
nfu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107393916 (cdk7)
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
107393916 (cdk7)
DNA repair and recombination proteins [BR:
nfu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107393916 (cdk7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Seadorna_VP7
ABC1
Kinase-like
Haspin_kinase
RIO1
APH
Motif
Other DBs
NCBI-GeneID:
107393916
NCBI-ProteinID:
XP_015828031
UniProt:
A0A9D2XDR7
LinkDB
All DBs
Position
sgr18:complement(20989897..20995367)
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AA seq
350 aa
AA seq
DB search
MALDVKIRAKRYEKLDFLGEGQFATVYKARDKLTDTIVAIKKIKVGHKTEAKDGVNRTAL
REIKLLQELHHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDTSLVLTPANIKAYILM
TLQGLEYMHQHWVLHRDLKPNNLLLDSNGVLKLADFGLAKAFGSPNRIYTHQVVTRWYRS
PELLFGAKMYGVGVDMWAVGCILAELLLRIPFLAGDSDLDQLTKIFEALGTPTEETWPGM
TSLPDYVSFKIFPGTPLEHIFSAAGDDLLELLQGLFTFSPSTRTTATQALKMKYFSNRPG
PTPGPQLPQPNCSAEALRENETAGLKRKIEGLETSDQNLLTFTFYVYLFS
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttgatgtaaaaatcagagcgaaacgatacgagaaactggattttctcggagag
ggtcagtttgccacagtctacaaagccagagacaaactgacagacacaatagttgccatc
aaaaagataaaagttggtcacaaaactgaagctaaagatggtgtaaatcggactgctctc
agggaaatcaaactgctacaggagctgcatcatccaaatatcattgggctgttggatgca
tttggacataaatcaaacatcagcctggtgtttgattttatggaaacagacctggaggtt
atcatcaaagacacaagcctagtcttgactccagccaatattaaagcctacatcctcatg
acattacaaggattagagtacatgcaccaacattgggtcctacatagggatttgaagccc
aacaatctgctgctagacagtaacggagtgttgaagttggctgattttggattggccaaa
gcttttggaagccccaacagaatctacactcatcaagttgttaccaggtggtaccgctcc
cctgaactcctgtttggtgccaagatgtatggagtgggtgttgacatgtgggctgtgggc
tgcatcttggctgagttgttacttcggataccattcctcgctggagactctgatcttgac
cagctgaccaaaatctttgaggccttaggaacacccacagaagaaacatggcccggaatg
acaagtctaccagactatgtgtcctttaagatatttcctggcacacctctcgagcacatt
tttagtgcagctggtgacgatttacttgagctcctacagggcctgtttaccttcagccct
tcaacaagaaccacagctacacaggctctaaagatgaaatacttcagtaatcggccgggt
ccaactcctggtccccaactcccccaacctaactgctcagccgaggctttgagagagaac
gaaacagctgggctcaagaggaaaatagaaggcttggaaacaagtgatcagaatttacta
acttttacattttatgtttatttatttagctga
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