Nothobranchius furzeri (turquoise killifish): 107395683
Help
Entry
107395683 CDS
T05163
Name
(RefSeq) collagen alpha-1(IX) chain-like
KO
K08131
collagen type IX alpha
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04510
Focal adhesion
nfu04512
ECM-receptor interaction
nfu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107395683
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107395683
09142 Cell motility
04820 Cytoskeleton in muscle cells
107395683
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
nfu00535
]
107395683
Proteoglycans [BR:
nfu00535
]
Extracellular matrix (ECM) proteoglycans
Others
107395683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
107395683
NCBI-ProteinID:
XP_015830600
UniProt:
A0A1A8UBH9
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
MAGAPCIKGPFLVVLLQLVLICSSQRSQGPPGPPGPPGVPGIDGIAGERGEDGEDGPPGP
DGDAGKLGSSGLPGIPGKDGLTGPVGDPGQDGPPGQKGEPGNPGPRGAAGVGPDGPPGPP
GPGGLLGELGKAGPPGAMGVRGPQGPRGPAGPRGASGMLGSADLCPNSCPPGTSGHPGLP
GMKGHKGVKGEAGEPGKQGHKGEEGEQGSLGEVGSQGPTGPQGIRGATGMMGPKGEMGAR
GPDGDPGSQGVGGATGDQGQRGVMGEPGPKGEMGVQGPRGITGLPGPKGEPGLPGVDGRE
GIPGMPGAKGSIGKSGVPGEVGLQGLPGFPGTPGPKGSSGPKGDAGQSGFPGTLGSAGKP
GERGEQGEIGPVGPIGEPGDIGEQGPVGPAGKPGARGPKGDPGLPGLPGPPGLPGAKGER
GERGDSGPKGEQGAQGDEGNPGDRGDSGEPGEAGPKGETGIPGETGQRGPEGSRGQPGVE
GPPGTPGPRGMQGNRGPRGVRGSQGPAGKEPSDQHVKQVCMRVMQEQLAQLAASLRRPET
GIAGLPGKPGPPGPPGQPGDNGFPGHAGARGLPGLKGPPGQIGLKGPKGEMGDRGSRGPT
VRGPKGQPGPPGLPGEPGKPGYGQEGRDGQRGPPGVPGQPGVPGPPGPAGLNGYCDPSAC
NLQAGAVQQSLDVKGPAGN
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggccggggccccgtgcatcaaagggccatttctagttgtgctcctgcagcttgtcctt
atctgctcctcacagaggagtcaaggaccccccggtcctcctggacccccgggagtccca
ggaattgatggcattgctggggaaagaggagaagacggcgaggacggtccacctggaccc
gatggggacgcaggtaaactcggctcttcaggattacccggaatccctggaaaagacggt
ttgaccggccccgtcggagaccctgggcaggacggtcctccgggacagaaaggtgaacct
gggaatcccgggcctcgcggagcagctggtgttgggccagatggaccccctggaccacca
gggcctggaggacttctgggtgaactgggaaaagctggcccaccaggagccatgggtgtg
agggggccacaggggcctcgtggacctgctggacccagaggggcttctggaatgctgggt
tctgctgatctgtgtccaaactcgtgtccgcctggtacctctggacatcctggccttcct
ggtatgaagggtcacaaaggggtgaagggtgaagcaggagaacctggtaaacaaggacac
aagggtgaagaaggggagcaagggagtctaggagaggtcggatctcaggggccaacggga
cctcaagggattcgtggcgccacagggatgatgggtcccaaaggagagatgggagctcga
ggtcctgatggagatcccggttctcaaggagtcgggggagcaactggagatcaaggccag
agaggagtgatgggtgagcctgggcctaaaggtgaaatgggcgttcaagggccaagaggg
atcacaggacttccaggtcctaaaggagaacctggtttaccaggtgtggatggccgtgag
ggtattcctgggatgcctggagcaaagggaagcattgggaagtcaggcgttcctggagag
gttggacttcaggggcttcctggtttccctggtacacctggaccaaaaggctcaagcggc
cctaagggtgatgctggtcagtcggggttccccggaacattaggatctgctggcaaacct
ggtgaacgtggagaacaaggagagataggacccgttggacccatcggagagcctggagac
atcggagagcagggtcctgtgggtccagctggaaagcccggcgcaagaggaccaaaaggt
gatcctggtcttcccggtctcccaggccctcctggactacccggagccaaaggagagagg
ggagagcgtggagattcaggacccaaaggagaacaaggcgctcaaggtgatgaaggaaat
cctggagaccgaggggattctggtgaaccgggcgaagctggacctaaaggagagactggt
atccctggtgaaactggccaaagaggtccagaaggaagtcgaggtcagccaggagttgag
ggacctcctgggacacctggacctcgagggatgcaagggaacaggggtccacgtggagtc
agagggtcccagggacctgcgggtaaagagccgagtgatcagcacgtgaaacaagtttgc
atgcgagtcatgcaagagcagttggctcagttagctgctagtttaagaaggccggagacc
ggcatcgctggtttacctggaaaaccgggacctcctggacctccagggcagccgggagat
aacggtttccctgggcatgctggagcaagaggtctcccaggactcaaagggccaccaggg
cagatagggctaaaaggaccaaaaggtgaaatgggagacaggggctccaggggccccacg
gtgagaggtcctaaaggtcagccaggaccccctggccttcctggggagccaggcaaacct
ggctacggtcaagaaggtcgagatgggcagagaggacctcctggcgttcctggacagcct
ggcgtgcccggtcctccaggtccagctggcctgaatggatactgtgacccatcagcctgc
aacctccaggctggagctgtccagcagtctctggatgtgaagggacccgcggggaactga
DBGET
integrated database retrieval system
