Candidatus Nitrososphaera gargensis: Ngar_c28480
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Entry
Ngar_c28480 CDS
T02305
Symbol
pdxS
Name
(GenBank) pyridoxal biosynthesis lyase
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
nga
Candidatus Nitrososphaera gargensis
Pathway
nga00750
Vitamin B6 metabolism
nga01100
Metabolic pathways
nga01240
Biosynthesis of cofactors
Module
nga_M00916
Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
nga00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
Ngar_c28480 (pdxS)
Enzymes [BR:
nga01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
Ngar_c28480 (pdxS)
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
His_biosynth
Dus
IGPS
NMO
TetR_C_27
NanE
FMN_dh
Peptidase_S66C
DUF3976
Motif
Other DBs
NCBI-ProteinID:
AFU59768
UniProt:
K0IKH5
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All DBs
Position
complement(2216877..2217848)
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AA seq
323 aa
AA seq
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MTISLVATEPKPKGVKVEIVENARTVRGTTLLKRGFAHMCKHGVVMDVTNVEQAVIAEEA
GAVAVMVLDKLPYDVRKAGGVARTASIKVIQEIMDAVTIPIMAKCRIGHIDEAKVLEATG
VDMIDESEVLTPADEERHIWKWDFTTPFVNGGKNLGEALRRIEEGCAMIRTKGEPGTGNV
AEAVTHIRMVNGEIRKLRSLYEDNDKQELMKAARELKVSYAIVEETARLGRLPVVNFAAG
GITTPADAALLMNLGCDGVFVGSGIFKSDDPAQRARAVVLATTFHDDPKIVMEAQKMVDE
KKSLLGMDTKNLELRMQERGQHA
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgacgatatccctcgtggccactgagccaaaaccaaagggcgtcaaggtagaaattgta
gagaatgcccgcacggttcgcggcactactttgttaaagcgcggctttgcgcacatgtgc
aagcacggcgtggtaatggacgtgacaaacgtcgaacaggcagtgatagcagaggaagca
ggcgcagtagcagtgatggtgcttgacaagctgccatacgacgtcagaaaggcaggcggc
gttgcaaggactgccagcatcaaggtaatccaagaaataatggatgcagtcacgatcccg
ataatggccaagtgcagaatcggccacatcgacgaggcaaaggtgctcgaagcgaccggt
gtcgacatgatcgacgaaagcgaagtgctgacgccagcggacgaagagcgtcacatctgg
aagtgggatttcactactccgtttgttaacggcggcaagaaccttggcgaggcccttcgc
aggatcgaggagggctgcgcgatgataaggacaaagggcgagccggggacgggcaacgtg
gcagaggcagtcacccacatccgcatggtcaacggcgagatacgcaaattgcgctcgctc
tatgaggataacgacaagcaggagctcatgaaggctgcacgcgagctaaaagtatcgtac
gcgattgttgaagaaacagcgcgccttggacggctgccggttgtcaatttcgcagctggt
ggtatcaccacgccggccgacgcagcactgctcatgaaccttggctgcgatggcgtgttc
gtcggctctggcatattcaaatcagacgacccggcgcagagggcaagggcggttgtgctt
gcaacgactttccatgacgaccccaagatagtcatggaggcgcaaaagatggtcgatgag
aaaaagtcgctccttggcatggacaccaagaacctagagcttcgtatgcaggaaaggggc
cagcacgcttga
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