Nannochloropsis gaditana: NGA_0353600
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Entry
NGA_0353600 CDS
T02917
Name
(RefSeq) serine threonine-protein phosphatase pp1-gamma catalytic subunit
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
ngd
Nannochloropsis gaditana
Pathway
ngd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ngd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NGA_0353600
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ngd01009
]
NGA_0353600
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngd03021
]
NGA_0353600
03019 Messenger RNA biogenesis [BR:
ngd03019
]
NGA_0353600
03041 Spliceosome [BR:
ngd03041
]
NGA_0353600
Enzymes [BR:
ngd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
NGA_0353600
Protein phosphatases and associated proteins [BR:
ngd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
NGA_0353600
Transcription machinery [BR:
ngd03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
NGA_0353600
Messenger RNA biogenesis [BR:
ngd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
NGA_0353600
Spliceosome [BR:
ngd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
NGA_0353600
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
Motif
Other DBs
NCBI-GeneID:
17361837
NCBI-ProteinID:
XP_005855061
UniProt:
K8YUE2
LinkDB
All DBs
Position
Unknown
AA seq
288 aa
AA seq
DB search
MEVVSAAISASSAAPSTTGGGGNTAAPSDAVLSEVGVIIEKLLAVRGTRQSSNMQPILIE
VEAPVKICGDLHGQYYDLLRLFEYGGYPPESNYLFLGDYVDRGKQSLETICLLLAYKIMY
PENFFILRGNHECASVNRIYGFYDECKRRYNIKLWKTLHLSPPPSLPSDPAPSPPTDVPD
TGLLCDLLWADPDKEINGWGENERGVSFTFGEDIVRSFLKRHDLDLICRAHQVVEDGYEF
FAQRQLVTLFSAPNYCGEFDNAGAMMSVDATLMCSFHILKSSEAQRGR
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggtctccgctgccatttctgcgtcttctgccgctcccagcacgactggagga
ggaggaaacacggctgcaccctctgatgctgttctttcagaagtaggagtcatcattgag
aagctcttggccgtgcgagggacgcgtcagtcgagtaacatgcagcccatcctcatcgaa
gtggaagcccccgtcaagatctgcggagacctccacggccagtattacgacctgttacgc
ctgtttgaatacgggggctacccaccggagagcaattatctttttcttggcgattacgtg
gaccgaggcaagcaatcgcttgagacgatctgcctcctcctcgcgtacaagatcatgtac
cccgagaatttcttcatcctccgagggaaccatgaatgtgcctccgtgaaccggatctac
ggcttctacgacgaatgcaaacgtcggtacaacatcaaactctggaagaccctccatctg
tcccctcctccctccctcccctcagatccggcgccttccccgcccaccgacgtgcctgac
actgggttgctctgcgacttgctctgggccgaccccgacaaggagatcaacgggtggggg
gagaacgagaggggcgtctccttcacttttggagaagacattgtcaggtcttttctcaag
cgacacgacctcgacctgatttgtcgagcccaccaggtggtagaagacggctacgaattc
tttgcacagcggcaactggtgacgctcttttccgcgccaaactactgtggcgagtttgat
aacgccggcgccatgatgagtgtggatgccactctcatgtgttccttccatattttaaag
tcctccgaggctcagcggggaagatga
DBGET
integrated database retrieval system
