KEGG   Natronobacterium gregoryi: Natgr_0319
Entry
Natgr_0319        CDS       T02383                                 
Name
(GenBank) ATP-dependent DNA ligase I
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
nge  Natronobacterium gregoryi
Pathway
nge03030  DNA replication
nge03410  Base excision repair
nge03420  Nucleotide excision repair
nge03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:nge00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Natgr_0319
   03410 Base excision repair
    Natgr_0319
   03420 Nucleotide excision repair
    Natgr_0319
   03430 Mismatch repair
    Natgr_0319
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nge03032]
    Natgr_0319
   03400 DNA repair and recombination proteins [BR:nge03400]
    Natgr_0319
Enzymes [BR:nge01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Natgr_0319
    6.5.1.6  DNA ligase (ATP or NAD+)
     Natgr_0319
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     Natgr_0319
DNA replication proteins [BR:nge03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Natgr_0319
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Natgr_0319
DNA repair and recombination proteins [BR:nge03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Natgr_0319
   NER (nucleotide excision repair)
    Other NER factors
     Natgr_0319
   MMR (mismatch excision repair)
    Other MMR factors
     Natgr_0319
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-ProteinID: AFZ71577
UniProt: L0AEL7
LinkDB
Position
complement(319520..321241)
AA seq 573 aa
MEFATFADRAAAIEAEPADLAIIEHVQDLLADTDGDAESGEPRTIEIVARFVQGRVFPAW
DSTTLDIGPSACYEAISRAAGRNVDTNDVEDRLADVGEIGEVAASYEFGGQQGLDAFGAG
NGSGALTVREVYDDLVALAAAEGEGSEDRKIDALFGLFNRCSSDEARYLARLVLSEMRIG
VGEGTVRDAIAAAFDIPQEHVERALQVSNDYGEVARVARDEGLDGLDAMALEVGRPVQAM
LAQTGTVTDALEAWEEAAVEWKYDGARIQLHYDPDGLEEGDGTTRVFSRNMEDVTAALPE
VVEFAEKTLAVPVILDGEVVAVDDAGDPLPFQEVLKRFRRKHDVAKAREDVAVRPVCFDC
LHADGVDLLEEPLTTRHERLEVVLTGDGRPEDVAGLSLLWLTDDPDEIESIDAEALESGH
EGIMLKNPESAYSPGRRGKNWRKRKPDVETLDCVVTGAEWGEGRRATFLGTFELSVRNET
TGELETVGKVATGITDEQLAELTELLEPHIATEEGQEVEIEPAVVFEVGYEEIQSSPTYS
SGYALRFPRFQAVRDDKAIEGADTLERVERLRS
NT seq 1722 nt   +upstreamnt  +downstreamnt
atggagttcgccacgttcgccgaccgagccgctgcgatcgaagccgagcctgccgatctg
gcgatcatcgaacacgtgcaggacctcctcgcggacaccgacggcgatgcggagtccggt
gagccccggaccatcgaaatcgtcgcccggttcgtccagggacgggtcttccccgcgtgg
gattcgacgacgctcgacatcgggccgagcgcctgttacgaggcgatctcacgcgcggcc
gggcgaaacgtagacacgaatgacgtcgaggatcgactcgccgacgtcggcgagatcggt
gaggtggccgcgagctacgagttcggcggccaacaggggctggacgcgttcggggctggt
aacggaagcggcgccctcaccgtccgcgaggtctacgacgacctcgtcgctctcgcggct
gccgaaggggaaggcagcgaagaccggaaaatcgacgccctcttcgggctcttcaaccgg
tgctcgagcgacgaagctcggtacctcgcccgactcgtcctctcggagatgcgcatcggc
gtcggcgaagggaccgtccgggacgccatcgccgcggccttcgacatcccccaggagcac
gtcgaacgggcactgcaggtctcgaacgactacggcgaagtcgcccgcgtcgcccgcgac
gagggactcgatggactggacgcgatggccctcgaagtcggccggcccgtccaggcgatg
ctcgcccaaacggggacggtgacggacgcactcgaggcgtgggaggaagccgcagtcgag
tggaagtacgacggcgctcgcatccagttacactacgatcctgacggactcgaggaggga
gacgggacgacgcgggtcttctcgaggaacatggaagacgtcaccgccgcactcccggag
gtcgtggaattcgccgagaagacgctcgcggtccccgtgatcctggacggcgaggtcgtc
gcggtcgacgacgccggcgatccactcccgtttcaggaggtgctcaagcggttccgccgg
aaacacgacgtcgcgaaggctcgcgaggacgtcgccgttcggccggtctgcttcgactgc
ctgcacgccgacggtgtggacctgctcgaggagccactgacgaccagacacgaacgactc
gaggtcgttctcaccggcgacggacgacccgaggacgttgccggactctccctgctgtgg
ctgaccgacgaccccgacgagatcgagtcgatcgacgcggaggcgctcgagtcgggtcac
gaggggatcatgctcaaaaaccccgagtcggcgtactcgccggggcggcgtggcaagaac
tggcgaaagcgcaaacccgacgtcgagacgttagactgcgtcgtcacgggagccgagtgg
ggcgaaggtcgacgagcgaccttcctgggcacgttcgaactctctgtcaggaacgagacg
acgggcgaactagagaccgtcggcaaggtcgcgaccggcatcaccgacgagcaactcgcc
gaactgacagagctgctcgagccccacatcgctacagaggagggacaagaagtcgagata
gagcctgcggtcgtcttcgaggtcggctacgaggagatccagtcctcgccgacgtactcg
tcgggatacgcgcttcggtttcctcgctttcaggcagttcgagacgacaaggctatcgag
ggcgcggacacgctcgagcgcgtcgaacgactgcgatcctaa

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