Novosphingobium ginsenosidimutans: FRF71_09685
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Entry
FRF71_09685 CDS
T06189
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
ngf
Novosphingobium ginsenosidimutans
Pathway
ngf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ngf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
FRF71_09685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngf03400
]
FRF71_09685
DNA repair and recombination proteins [BR:
ngf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
FRF71_09685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
QEA16380
UniProt:
A0A5B8S4N5
LinkDB
All DBs
Position
complement(1947726..1948580)
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AA seq
284 aa
AA seq
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MPARPYWKGHIRLALVSIPVEVYAAARSSNATTFRQIHEPSGKPVHYLKAVTGIGPIDPD
DIIRGFEYEKDRFVLLEDEELEAVRLESRKTLDLALFVDRDAIDHTYFEKPYYVVPADDL
AVEAFVVLREALRASRRTGIGQLAMRGREYIVALSPCGRGMVMETLRYAEELQKAQNYFR
DIPDQEPDQELLELAESLIERKTGKFEPGMFHDRYREALRDLVERKLKAKGRKIVAEDET
PAETGGSNVIDLMAALKRSLEKPERAASASKTKAPPTRKAGRKR
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgcacgcccctattggaaaggtcatatccggctcgccctggtctcgatcccggtt
gaggtttacgcggccgcgcgcagcagcaatgccaccacctttcgccagatccacgagccc
agcggcaaaccggtccattacctgaaggcggtgaccggaatcggcccgattgatcctgac
gacatcatccgcggcttcgaatacgagaaggaccgcttcgtcctgctggaggacgaggag
cttgaggcggtccggctggaatcacgcaagacgctggacctggccctgttcgttgaccgc
gacgcgatcgaccacacctatttcgaaaagccctattacgtcgtcccggcggatgacctg
gcggttgaggctttcgtcgtgctgcgcgaagcgctgcgcgccagtcggcgcaccggaatc
ggccagctcgccatgcgcggacgcgaatacatcgtcgccctatcgccttgcggccgcgga
atggtgatggaaacgctgcgctatgccgaggaactgcagaaggcgcaaaactactttcgg
gacattcccgatcaggaaccggaccaggaactgctcgaactggcggagtcgctgatcgag
cggaagaccgggaagtttgaacccggcatgttccacgatcgctaccgcgaggcgctgcgc
gatctggttgagcgcaagctgaaggccaagggccgcaagatcgtggccgaggatgagacc
ccggccgagaccggcggttcgaacgtcatcgatctgatggcggcattgaagcgttcgttg
gagaagccggagcgggcggcttcggccagcaagaccaaggccccgcccacgcgcaaagcc
ggccgcaagcgctag
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