KEGG   Novosphingobium ginsenosidimutans: FRF71_09685
Entry
FRF71_09685       CDS       T06189                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
ngf  Novosphingobium ginsenosidimutans
Pathway
ngf03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ngf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    FRF71_09685
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ngf03400]
    FRF71_09685
DNA repair and recombination proteins [BR:ngf03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     FRF71_09685
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: QEA16380
UniProt: A0A5B8S4N5
LinkDB
Position
complement(1947726..1948580)
AA seq 284 aa
MPARPYWKGHIRLALVSIPVEVYAAARSSNATTFRQIHEPSGKPVHYLKAVTGIGPIDPD
DIIRGFEYEKDRFVLLEDEELEAVRLESRKTLDLALFVDRDAIDHTYFEKPYYVVPADDL
AVEAFVVLREALRASRRTGIGQLAMRGREYIVALSPCGRGMVMETLRYAEELQKAQNYFR
DIPDQEPDQELLELAESLIERKTGKFEPGMFHDRYREALRDLVERKLKAKGRKIVAEDET
PAETGGSNVIDLMAALKRSLEKPERAASASKTKAPPTRKAGRKR
NT seq 855 nt   +upstreamnt  +downstreamnt
ttgcctgcacgcccctattggaaaggtcatatccggctcgccctggtctcgatcccggtt
gaggtttacgcggccgcgcgcagcagcaatgccaccacctttcgccagatccacgagccc
agcggcaaaccggtccattacctgaaggcggtgaccggaatcggcccgattgatcctgac
gacatcatccgcggcttcgaatacgagaaggaccgcttcgtcctgctggaggacgaggag
cttgaggcggtccggctggaatcacgcaagacgctggacctggccctgttcgttgaccgc
gacgcgatcgaccacacctatttcgaaaagccctattacgtcgtcccggcggatgacctg
gcggttgaggctttcgtcgtgctgcgcgaagcgctgcgcgccagtcggcgcaccggaatc
ggccagctcgccatgcgcggacgcgaatacatcgtcgccctatcgccttgcggccgcgga
atggtgatggaaacgctgcgctatgccgaggaactgcagaaggcgcaaaactactttcgg
gacattcccgatcaggaaccggaccaggaactgctcgaactggcggagtcgctgatcgag
cggaagaccgggaagtttgaacccggcatgttccacgatcgctaccgcgaggcgctgcgc
gatctggttgagcgcaagctgaaggccaagggccgcaagatcgtggccgaggatgagacc
ccggccgagaccggcggttcgaacgtcatcgatctgatggcggcattgaagcgttcgttg
gagaagccggagcgggcggcttcggccagcaagaccaaggccccgcccacgcgcaaagcc
ggccgcaagcgctag

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