Neorhizobium galegae bv. orientalis HAMBI 540: RG540_CH09080
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Entry
RG540_CH09080 CDS
T03244
Name
(GenBank) Phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ngg
Neorhizobium galegae bv. orientalis HAMBI 540
Pathway
ngg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ngg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RG540_CH09080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngg03400
]
RG540_CH09080
Enzymes [BR:
ngg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RG540_CH09080
DNA repair and recombination proteins [BR:
ngg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RG540_CH09080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF4195
HTH_15
Senescence_reg
Motif
Other DBs
NCBI-ProteinID:
CDN47097
UniProt:
A0A068SLH3
LinkDB
All DBs
Position
complement(879262..880161)
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AA seq
299 aa
AA seq
DB search
MNLAKDMDAPELAALLHFYADAGVEWLVEDEPVDRFAQFAAQKAAQAEARAPASARQQQP
TNYEQAPTSQAAAATPKRTTPTTRASAPPPASAPVSVPDEQAVASARFAAESARSLDELK
TALEAFNGCNLKNGARNTVFASGNPASGIMVIGPMPNADDDRDGIPFSGRQGQLLDRMLG
AIGLSRDGVLLTNVIPWRPPGNRMPSQAEMDICRPFLERQVALAEPKLLLLLGNFPARFF
FGGNGTIHSMRGEWRDLSFGGITVSAIATLHPQELLAAPANKALAWQDLLMFKMRFSGH
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcgccaaagacatggacgctcccgagctcgccgcccttctgcatttctatgcg
gatgcgggtgtcgagtggcttgtcgaggatgagccggtcgaccggttcgcgcaatttgcg
gcccagaaggcagcgcaggccgaagcgcgagcgccggcgtctgcccggcagcagcagccg
acgaactatgagcaggcgccgacctcccaggcagccgcggcaacgccaaaacgcaccacg
ccaaccacacgcgcgtcagcacctccacccgcctccgcgcccgtatcggtaccagacgaa
caggcagtcgcctcggcgcgattcgcggccgaaagcgcccggtcgctcgacgagctcaaa
accgcgctcgaagccttcaacggctgcaacctgaagaacggcgcgcgcaacacggtgttt
gcgagcggcaaccccgcttccggcatcatggtcatcggcccgatgccgaatgctgacgac
gaccgtgacggcattcccttctccggacggcaagggcagttgctggaccgcatgctcggc
gcgatcgggctttcccgcgacggcgttctgctcaccaatgtcatcccctggcggccgccg
ggtaaccgcatgccctcgcaggccgagatggatatctgccggccgttcctggagcgccag
gtggcgctcgccgaaccgaaactgctgctgctgctcggcaattttcctgcccgtttcttc
ttcggcggcaatggcacgatccattcgatgcgcggcgaatggcgcgatctctccttcggc
ggaatcaccgtgtcggcgatcgccacgctgcatccgcaggaactgctggcggcacccgcc
aacaaggcgctggcctggcaggacctgctgatgttcaaaatgcggttttccgggcactga
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