Neorhizobium galegae bv. orientalis HAMBI 540: RG540_CH12970
Help
Entry
RG540_CH12970 CDS
T03244
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
ngg
Neorhizobium galegae bv. orientalis HAMBI 540
Pathway
ngg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ngg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RG540_CH12970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngg03021
]
RG540_CH12970
03400 DNA repair and recombination proteins [BR:
ngg03400
]
RG540_CH12970
Enzymes [BR:
ngg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RG540_CH12970
Transcription machinery [BR:
ngg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RG540_CH12970
DNA repair and recombination proteins [BR:
ngg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RG540_CH12970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
CDN47477
UniProt:
A0A068SMH7
LinkDB
All DBs
Position
1252273..1256409
Genome browser
AA seq
1378 aa
AA seq
DB search
MAQTLSFNGRRRVRKFFGKIPEVTEMPNLIEVQKASYDQFLMVDEPKGGRPDEGLNAVFR
SVFPITDFSGASMLEFVSYEFELPKFDVEECRQRDLTYAAPLKVTLRLIVFDIDEDTGAK
SIKDIKEQSVYMGDMPLMTDNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKSHSSGKLLF
AARVIPYRGSWLDIEFDAKDIVYARIDRRRKIPVTSLLMALGMDGEEILSTFYTKSSYQR
DGDGWRIPFQPETLKGAKTLSDMIDADTGEVVVESGKKLTPRLLRQLTDKGLKALKATND
DIYGNYLAEDIVNAATGEIYLEAGDEIDEKTLPVILNAGFDEVPVLGIDHINVGAYIRNT
LSADKNENRQDALFDIYRVMRPGEPPTMESAEAMFNSLFFDSERYDLSAVGRVKMNMRLD
LEVADTVRTLRKDDILAVVRMLVELRDGKGEIDDIDNLGNRRVRSVGELMENQYRLGLLR
MERAIKERMSSIEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQVNPLSEITHKRRL
SALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIESP
YRKIIDGIVTKEVLYLSAMEEAKYYVAQANAELDKNGSFVEEFVVCRHAGEVMLSPRDTI
NLMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRAEAPFVGTGMEPVVAR
DSGAAIAARRSGVVDQVDATRIVIRATEDLDPSKSGVDIYRLQKFQRSNQNTCVNQRPLV
AVGDILNKGDIIADGPSTDLGDLALGRNALVAFMPWNGYNYEDSILLSERIVSDDVFTSI
HIEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVQPGDILVGKITPKG
ESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGTFGTVVEVRVFNRHGVEKDERAMAIERE
EIERLAKDRDDEQSILDRNVYSRLTDMLRGQMSVAGPKGFKKGIELTNAIISEYPRSQWW
MFAVEDEKVQGEVEALRGQYDESKSRLEQRFMDKVEKVQRGDEMPPGVMKMVKVFVAVKR
KIQPGDKMAGRHGNKGVVSRIVPVEDMPFLEDGTHVDIVLNPLGVPSRMNVGQILETHLA
WACAGMGKRIGAMLEEYRKSNDITDLKKELTEAYQSEANAEVASFDDDSLVRLAEQSKRG
LSIATPVFDGAHEPDVAAMLTKAGLDPSGQSVLYDGRTGEQFDRKVTVGYMYMIKLNHLV
DDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVA
GRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLSVELENSKIDEANAGQLPDAAE
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaccctttcctttaatggtcgcaggcgcgtacgcaagttttttggaaaaatc
cccgaagtcacggagatgccgaacctcatcgaggttcagaaggcatcctatgaccaattc
ctgatggtcgatgaaccgaagggcggtcgtccggacgaaggtctgaacgccgtcttccgg
tcggtctttccgatcaccgatttttccggcgcctccatgctcgaattcgtatcctacgaa
ttcgagctgccgaagttcgacgtggaagaatgccgtcagcgcgatctgacctatgcggcg
ccgctgaaggtgactctgcgcctgatcgtgttcgatatcgacgaggatacgggcgcaaag
tcgatcaaggacatcaaggagcagtcggtctacatgggcgacatgccgctcatgaccgat
aacggtacgttcatcgtgaacggcaccgagcgcgtgatcgtgtcccagatgcaccgttcg
ccgggcgtcttcttcgaccacgacaagggcaagagccattcttccggcaagctgctcttc
gcagcccgcgtcattccgtatcgcggttcctggctcgatatcgaattcgatgccaaggat
atcgtctacgcccgcatcgaccgccgccgtaagatccccgtgacctcgctgctgatggcg
cttggcatggacggcgaagaaatcctgtcgaccttctatacgaagtcgtcctatcagcgc
gacggcgatggctggcggattccgttccagccggaaactctgaagggtgccaagaccctt
tccgacatgattgacgccgataccggcgaagtggttgtcgaatccggcaaaaagctcacg
ccgcgccttctccgtcagctgacggacaagggcctgaaggcgttgaaggcaaccaatgac
gacatctacggcaactatcttgccgaagacatcgtcaacgcggcaaccggcgagatctac
ctcgaagccggcgacgagatcgacgaaaagaccctgccggtcatcctcaatgccggtttc
gacgaagttccggttctcggcatcgaccatatcaatgtcggcgcctacatccgcaacacg
ctgtcggccgacaagaacgagaaccgtcaggacgctctgttcgacatctaccgcgtcatg
cgtccgggtgaaccgccgaccatggaatcggccgaagccatgttcaactcgctgttcttc
gattcggagcgttacgacctctccgccgtcggccgcgtcaagatgaacatgcgcctcgac
ctcgaagtcgccgacaccgtccgcacgctccgcaaggacgacatcctggccgtagtccgg
atgctggtcgaactgcgcgacggcaagggcgaaatcgacgacatcgacaacctcggcaac
cgccgcgtccgttctgtcggcgaactgatggaaaatcagtatcgcctcggcctgctccgc
atggagcgcgccatcaaggaacgcatgtcgtcgatcgagatcgacacagtcatgccgcag
gacctgatcaacgcgaagcctgccgctgccgcggttcgcgaattcttcggttcctcgcag
ctgtcgcagttcatggaccaggtgaacccgctttcggaaatcacccacaagcgccgtctt
tcggcacttggcccgggtggtctgacccgcgagcgcgccggcttcgaagtccgcgacgtt
caccccacccattacggccgtatttgcccgatcgaaacgccggaaggcccgaacatcggt
ctgatcaactcgcttgcaacctttgcccgcgtcaacaagtacggcttcatcgagagcccg
taccgcaagatcatcgacggcatcgtgaccaaggaagtgctttacctctccgctatggaa
gaggcgaagtattacgttgcacaggcgaacgccgaactggataagaacggctctttcgtg
gaagagttcgtggtctgccgtcatgccggcgaagtcatgctgtccccgcgcgacaccatc
aacctgatggacgtctcgccgaagcagctcgtttcggtcgcggccgctctgatcccgttc
cttgaaaacgacgacgccaaccgcgctctcatgggctcgaacatgcagcgtcaggccgtg
ccgctggtacgtgctgaagctccgttcgtcggcaccggcatggaaccggtcgtcgcccgc
gactccggtgcagcgattgctgcccgccgtagcggcgtggtcgaccaggtcgacgcgacg
cgtatcgttatccgcgccaccgaagacctcgatccgtcgaagtcgggcgtcgatatctat
cgtctgcagaagttccagcgttcgaaccagaacacctgcgtcaaccagcgtccgctggtc
gccgtcggcgacatcctgaacaagggcgacatcattgccgacggtccgtcgacggacctt
ggtgacttggcgctcggccgcaacgcgctcgtcgcgttcatgccctggaacggctacaac
tacgaagactcgatcctgctctccgagcgcatcgtatcggacgacgtgttcacctccatc
cacatcgaagaattcgaagtgatggcgcgtgacaccaagcttggtccggaagaaatcacg
cgcgacattccgaacgtttcggaagaagcgctgaagaacctcgacgaagccggcatcgtc
tacatcggcgccgaagtccagccgggcgacattctcgtcggcaagatcactccgaagggc
gaaagcccgatgacgccggaagaaaagcttctgcgcgccatcttcggtgaaaaggcctcc
gacgttcgcgacacctccatgcgcatgcctccgggcacgttcggcacggtcgtcgaagtc
cgcgtcttcaaccgtcacggtgtggagaaggacgaacgcgccatggcgatcgagcgtgag
gaaatcgaacgcctcgccaaggaccgcgacgacgagcagtcgattcttgaccgcaacgtc
tatagccgtctgacggacatgctgcgcggccagatgtcggttgccggtccgaagggcttc
aagaagggcatcgagctcaccaacgccatcatctccgaatatccccgctcgcagtggtgg
atgttcgcagtcgaggacgaaaaggtgcagggcgaagtcgaagcgcttcgcggccagtac
gacgaatccaagtcgcgccttgaacagcgcttcatggacaaggtcgaaaaggtccagcgc
ggcgacgaaatgcctccgggcgtcatgaagatggtcaaggtcttcgtcgctgtgaagcgc
aagatccagccaggcgacaagatggccggccgtcacggcaacaagggcgtcgtgtcgcgc
atcgtgccggtcgaggacatgccgttcctcgaagacggcacgcatgtcgacatcgttctg
aacccgctcggcgtgccttcgcgcatgaacgtcggtcagatcctcgagacgcacctggcc
tgggcttgcgccggcatgggcaagcgtatcggtgcgatgcttgaagagtaccgcaagtcg
aacgatatcaccgacttgaagaaagagctgacggaagcctatcagagtgaggcaaacgct
gaagttgccagcttcgacgacgactcgctcgttcgtcttgccgagcagtccaagcgtggt
ctgtcgatcgcaacgccggtcttcgacggtgcgcatgagccggacgtcgcagcgatgctg
accaaggcgggcctcgatccgtccggtcagtcggtcctctatgacggccgtaccggtgag
cagttcgaccgcaaggtgactgtcggctatatgtacatgatcaagctgaaccacctcgtg
gacgacaagatccacgcgcgttcgatcggtccgtactcgctggtcacccagcagccgctc
ggtggcaaggcgcagttcggcggccagcgcttcggcgaaatggaagtctgggcgctcgaa
gcctacggcgccgcctacacgctgcaggaaatgctgaccgtgaagtcggacgacgtggcc
ggccgtaccaaggtctacgaagcgatcgttcgcggcgacgacacgttcgaggcaggcatt
ccggagagcttcaacgttctcgtcaaggaaatgcgctctctcggcctgtccgtcgagctc
gagaactcgaagatcgacgaggcgaacgccggtcagctgcccgacgcagccgaataa
DBGET
integrated database retrieval system
