Nannospalax galili (Upper Galilee mountains blind mole rat): 103725075
Help
Entry
103725075 CDS
T03372
Symbol
Strc
Name
(RefSeq) stereocilin
KO
K24636
stereocilin
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ngi03037
]
103725075 (Strc)
Cilium and associated proteins [BR:
ngi03037
]
Other cilia and associated proteins
Stereociliary proteins
103725075 (Strc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Stereocilin
SRCR_2
Motif
Other DBs
NCBI-GeneID:
103725075
NCBI-ProteinID:
XP_008820527
LinkDB
All DBs
Position
Un
AA seq
1768 aa
AA seq
DB search
MALNLWPLLLLLLLIFLLIVTLAPTGPQSLDAGLSFLKSFISTLDQAPQHSLSRAQFSAF
LANISSFELGRMGEGPVGEPPPLQPPALRLHDFLVTLRGSPDWEPMLGLLGDVLALLGQE
QTPRDFLVHQAGVLGGLVEVLLGALVPGGPPSPTRPPCTRDGPSDCVLTADWLPSLLLLL
EGTRWQALVQLQSSVDPTNVTGLDGRETAPHFLQGLLGLLTPTGELGSEEALWGGLLRTV
GAPLYAALQEGLLRVTHSLQDEVFSILGQPEPDTNGQCQGGNLQQLLLWGIRHNLSWDVQ
ALGFLSGSPPPPPALLHCLSTGVPLPRASQTSVHISPRHRRAISVEALCQNHSGPAPPYS
ISNFSIHLLCQLTKPATPQPLPSTAAICQTAVWYAVSWASGAQSWLQACHDQFPDQFLDA
VCSNLSFSALSGPNRRLVKRLCAGLLPPPTNCPEGLVPVPLTPEIFWGCFLENETLWAER
LCVEESLQAVPPRNQAWIQHVCQGPTLDATAFPPCHVGPCGERCPDGGSFLLMVCANDTM
YEALVPFWAWLAGQCRISRGGNDTCFLEGMLGPLLPSLPPLGPSPLCLAPGPFLLGMLSQ
LPRCQSSVPALAHPTRLHYLLRLLTFLLGPGAGGDETQGMLGQALLLSSLPDNCSFWDAF
RPEGRHSVLRTVGEYLQQEQPTPPGFESTVSLSSGMSKMELLSCFSPVLWDLLQREKSVW
ALKILVQAYLHMPPEDLQQLVLSAEMEAAQGFLTLMHRSWAQLQVPPSEEQAMGRLTALL
LQRYPRLTSQLFIDLSPLIPFLAVSDLMRFPASLLANDSVLAAIRDHSSGMKPEQKEALA
KRLLAPELFGEVPDWPQERLWAVLPLLPHLPLENFLQLSPHQIQALEDSWPVAGLGPGHA
RHVLRSLVNQSVEDGEEQVRRLGSLACFLSPEELQSLVPLSDPMGPVEQGLLECAANGTL
SPEGRVAYELLGVLRSSGGAVLSPRELRVWAPLFPQLGLRFLQELSETQLRAMLPALQGA
SVTPAQAVLLLGRLLPRHDLSLEELCSLHPLLPGLSPHTLQAIPKRVLVGACSCLAPELS
RLSACQTAALLQAFRVKDGIKNMGTTGAGAAVCIPGQPIPTTWPDCLLPLLPLKLLQLDT
AVLLANRRRYRQLPWSEQQAQFLWKKMQMPTNVTLRNLQALGNLAGGMSCEFLQQINSMV
DFLDVVHMLYQLPTGVRGSLRACIWAELQRRMAMPEPELTTLGPELSELDTKLLLDLPIQ
LMDRLSNDSIMLVVELIQSAPEQLLALTPFHQEALAEKALKNLVPKETPISEEALETLGP
LVGFLGTESTRRIPLSILLSHLSQLQGFCLGEMFATELGWLLLQEPVLGKPELWSQDEVE
QAGRLVFTLSTEAISLIPREALGPETLERLLEKQQSWEQSRVGHLCVGPQLAHKKAALVA
GIVRPAAEGLPEPVPNCADIRGTFPAAWSATQIAEMELSDFEDCLALFAGDPGLGPEELR
AAMGKAKQLWGPPQGFRPEQILQLGRLLIGLGEQELQELILVDWGVLSTLGQIDGWSSVQ
LRVVVSSFLQQSGRHVSHLDFIHLTALGYTLCGLRPEELQHISSWEFSQAALFLGNLHLP
CSEEQLEVLAYLLVLPGGFGPVSNWGPEIFTEIGTIAAGIPDLALSALLQGQIQGLTPLA
ISVIPAPKFAVVFNPIQLSSFTSVQAVAVTPEQMAFLSPEQRRAVAWAQHEGREIPEQQG
RSSAWGLYDWFQSSWSLALTISFIDHLL
NT seq
5307 nt
NT seq
+upstream
nt +downstream
nt
atggctctgaatctctggcccctgctgctgctattacttctgatctttctccttatagtg
actctggcccctacagggcctcagtctttggatgctggtctctccttcctgaagtcattc
atctccactctggaccaagctccgcagcattccctcagccgggcacagttctctgcattc
ctggccaacatttcttcctttgagcttgggaggatgggggagggaccagtaggagagccc
ccacctctccagcccccggccctccggcttcacgatttcctagtaacactgagaggaagc
ccggactgggagccaatgctagggcttctgggggatgtgctggcactgctgggacaggag
cagactccccgggactttttggtgcaccaggcaggtgttctgggtggacttgtggaggta
ctgctaggagctctagttcctgggggtcctccttcccccacacggcccccatgcacccgt
gatgggccctctgactgtgtcctgactgctgattggctgccttctctgctattgttgtta
gagggcacacgctggcaggccctggtgcagttgcagtccagtgtggatcccaccaatgtc
acaggtcttgatgggagagagacagctcctcactttttacagggtcttttgggcttgctt
accccaacaggggagctgggttctgaggaggctctttggggcggtctgctacgcacagtg
ggggcccccctctatgctgccttacaggaggggctgcttcgtgtcactcactccctgcag
gatgaggtcttttccattctgggccaaccagagcctgataccaatgggcagtgtcaggga
ggtaaccttcaacagctgctcttatggggcattcggcataacctttcctgggatgtccag
gcgctgggttttctgtctggatcgccacctccaccccctgccctcttgcactgcctgagc
acaggagtgcctctgcccagggcttcccagacttcagttcacatcagtcctcgacatcgg
agagccatctctgtggaggccctctgccagaaccactcaggcccagcaccaccctacagc
atttccaacttctctatccacttgctctgccagcttaccaagcctgccaccccacagccc
cttcccagcactgctgctatctgccagacagctgtgtggtatgcagtctcatgggcatca
ggtgcccaaagttggctccaggcctgccatgatcaatttcctgatcagtttctggatgca
gtctgcagcaatctctcattttcagccctgtcgggccccaatcgccgcctggtaaagagg
ctttgtgccggcctgctcccgccccccaccaactgtcctgaagggctggtccctgtgcct
ctcaccccagagatcttttggggttgcttcttggagaatgagacattgtgggctgagcgg
ctatgtgtggaggagagtctgcaggctgtgcccccccgaaaccaggcttggattcagcat
gtatgccagggccctaccttggatgccactgccttcccaccttgccatgttggaccctgt
ggggaacgctgtccagatggggggagcttcctgctcatggtctgtgccaatgataccatg
tatgaggccctggttcccttctgggcttggttagcaggccagtgcaggataagtcgtgga
ggcaatgacacttgctttctagaaggcatgctgggcccccttctgccttctctgccacct
ttgggaccatccccactctgcctggcccctggcccctttctgcttggcatgctatcccaa
ttgccacgctgtcagtcctctgtgccagctcttgcccaccccacacgcctgcattatctc
ctgcgtctactgaccttccttctgggtccaggggctggaggggatgagacccaagggatg
ttgggtcaagccctgctactctccagtctcccagacaattgttcattctgggatgctttc
cgcccagagggccgtcacagtgtactgcggacagtaggggagtacctgcagcaggaacag
ccaaccccaccaggcttcgagtccactgtcagcctcagctctggtatgagcaagatggag
ctgctgtcctgcttcagtcctgtattatgggatctacttcagagagagaagagtgtttgg
gccctgaagatcttagtacaggcatacctacacatgcctccagaagatcttcagcaattg
gtgctttcagcagagatggaggctgcacagggcttcctgacacttatgcatcgttcctgg
gcccagcttcaggtaccaccatctgaagaacaggccatgggtcgcctaacagccctgctg
ctccagcggtacccacgcctcacctcccagctcttcattgatctgtcaccactcatccct
ttcttggctgtctctgatctgatgcgcttcccagcatctcttttggccaatgacagcgtt
ctggctgccatccgggatcacagctcaggaatgaaacctgaacagaaggaggcccttgca
aaacgactgttggcccctgagctctttggagaagtgcctgattggccccaggagcggctg
tgggcagtgctacccctgctcccccatcttcctctggagaattttctgcagctcagccct
caccagatccaagccctggaggatagttggccagtggcaggtcttgggccagggcatgcc
cgacatgtgctgcgtagcctggtgaaccaaagtgtcgaggatggcgaagagcaggtgcgc
aggcttgggtccctcgcatgtttcctgagtcctgaagagctacaaagcctggtgccttta
agtgatccaatgggacctgtagaacaggggctgctggaatgtgcagccaatgggaccctc
agtccagaaggacgggtggcatatgaacttctgggggtgctgcgctcatctggaggagct
gtcttaagcccccgagagctacgggtctgggctcctctctttcctcagcttggcctccgc
ttcctgcaggagctgtcagagacccagctcagagccatgcttcctgccctacagggagcc
agtgtcacacctgcccaggctgttctgctgcttggaaggctcctccctaggcatgatctg
tccctggaggaactctgctccttgcatcctctcctgccaggtctcagcccccacacactc
caggccattcctaaacgagttctggttggggcttgttcctgcctggcccctgaattgtca
cggctatcagcttgccagacggctgcactgctgcaggcctttcgggtgaaagatggcatt
aaaaatatgggtacaacaggcgctggtgcagctgtgtgcattcctggtcagcccatcccc
accacttggccagactgcctgcttcccctgctcccattaaagctactacagctggacact
gcagttcttctggcaaaccgaaggcgctatcggcagctgccttggtctgagcagcaggca
cagtttctctggaagaagatgcagatgcctaccaatgtgaccctcaggaatctgcaggct
ctgggcaacctggcagggggaatgtcctgtgagtttctgcagcagatcaactcaatggta
gacttccttgatgtggtacacatgctctaccaactgcccactggtgttcgagggagcctg
agggcctgtatctgggcagagctacagaggaggatggcaatgccagagccagagctgacc
accctaggtccagaactgagtgagcttgacacaaagctacttctggacttaccgatccag
ctgatggatagattatccaatgattccatcatgttggtagtggagttgatacagagtgct
ccagagcagctactggcactgaccccattccaccaggaagccctggcagagaaggcacta
aaaaacctggttccaaaggagaccccaatctcagaagaagccctggagacattgggcccc
ttggttggattcctgggaacagagagcacacggcggatccctttatcgattctgctgtcc
catctcagtcagctgcagggcttctgcctaggagagatgtttgccacagagcttggatgg
ctgctattgcaggaacctgttcttgggaaaccagagttgtggagccaggatgaagtagaa
caagctggacgcctagtattcactctgtctactgaggctatttccttgatccccagggag
gctttgggcccagagaccctggagcggcttctagaaaagcagcagagctgggagcagagt
agagtcggacatctgtgtgttggtccacagcttgctcacaagaaagcagctctggtggct
gggattgtacgtccagctgctgagggtctcccagagcctgtcccaaactgtgcagacata
cgggggaccttcccagcagcctggtctgcaacacagattgcagagatggaactttcagac
tttgaagactgcctggcactatttgcaggagacccgggacttgggcctgaggaactacgg
gcagccatgggcaaagcaaagcagttgtggggtcccccccaaggattccgtcctgagcag
atcctgcagctgggccggctcttaataggtctaggagagcaggagctacaggagctgatc
ctggtagactggggagtgctgagcaccctagggcaaatagatggctggagctctgtccag
ctccgagttgtggtctccagttttctacagcagagtggtcggcatgtgagccacttggac
ttcattcacctgacagcactgggttacacactttgtggactgcggccagaggagttacag
catatcagcagttgggagtttagccaagcagctctctttctgggtaacctgcatctccca
tgctctgaggaacagctggaggttctggcctacctacttgttctgcctggtggctttggc
ccagtcagcaactggggacctgagatcttcactgaaattggcacaatagcagctggaatc
ccagacttggctctttcagcattactgcagggacagatccagggcctaactcctcttgcc
atttctgtcatccctgctcctaagtttgcagtggttttcaaccccatccagctatctagt
ttcactagtgttcaggctgtagcggtcactcctgagcaaatggcctttctgagtcctgag
cagcgaagagcagttgcctgggcccagcacgaagggagggagattccagaacagcagggt
cgaagctcagcctggggtctctatgactggttccagtcctcctggtctctggcactgacc
atcagctttattgatcacctgttatga
DBGET
integrated database retrieval system
