Nannospalax galili (Upper Galilee mountains blind mole rat): 103729283
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Entry
103729283 CDS
T03372
Symbol
Tial1
Name
(RefSeq) TIA1 cytotoxic granule associated RNA binding protein like 1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngi03019
]
103729283 (Tial1)
03041 Spliceosome [BR:
ngi03041
]
103729283 (Tial1)
Messenger RNA biogenesis [BR:
ngi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
103729283 (Tial1)
Spliceosome [BR:
ngi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
103729283 (Tial1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Nup35_RRM_2
Calcipressin
RBD_AKAP-17A
Tmrp11_N
Motif
Other DBs
NCBI-GeneID:
103729283
NCBI-ProteinID:
XP_008825527
LinkDB
All DBs
Position
Un
AA seq
392 aa
AA seq
DB search
MMEDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQ
HTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGD
LSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWL
GGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQ
TFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTK
NFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPPYGVYGQPWNQQGFGVDQSPSAAWMG
GFGAQPPQGQAPPPVIPPPNQAGYGMASYQTQ
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagacgacggacagccccggactctatacgtaggtaacctctccagagatgtg
acagaagtccttatacttcagttattcagtcagatcggaccctgtaaaagctgtaaaatg
ataacagagcaacccgatagcagaagggtcaactcttctgttggattttctgttttgcag
catacaagcaatgacccatattgctttgtggaattttatgaacacagagatgcagctgct
gcattagctgctatgaatgggagaaaaattttgggaaaggaggtcaaagtaaactgggca
acaacaccaagtagccagaaaaaagacacttccaatcacttccatgtgtttgttggggat
ttgagtccagaaatcacaacagaagatatcaaatcagcatttgccccctttggtaaaata
tcggatgcccgggtagttaaagacatggcaactggaaagtccaaaggctatggttttgta
tctttttataataaactggatgcagaaaatgcaattgtgcatatggggggtcagtggttg
ggaggtcgacaaatcagaaccaattgggccacacgtaaaccacctgcacctaaaagtaca
caagaaactaacactaagcagttgagatttgaagatgtagtaaaccagtcaagtccaaaa
aattgtactgtgtactgtggaggaatcgcttctgggctcacagatcagcttatgagacag
acattctccccatttggacaaattatggagataagagtttttccagagaagggttactca
tttgtcagattttcaactcatgaaagtgcagcccatgccattgtttcagtgaatggtact
acaatcgaaggacatgtggttaaatgctattggggtaaagaatctcctgatatgactaaa
aacttccaacaggttgactacagtcagtgggggcagtggagccaagtgtatggaaaccca
caacagtacggacagtacatggcaaatgggtggcaagttccgccttacggagtatatggg
caaccatggaatcaacaaggatttggagtagatcaatcaccgtctgctgcctggatgggt
ggatttggtgctcagcctccccaaggacaagctcctccccctgtaatacctcctcctaac
caagctggatatggtatggcaagttaccaaacacagtga
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