Nannospalax galili (Upper Galilee mountains blind mole rat): 103739699
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Entry
103739699 CDS
T03372
Symbol
Phf1
Name
(RefSeq) PHD finger protein 1
KO
K11467
PHD finger protein 1
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
103739699 (Phf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngi03000
]
103739699 (Phf1)
03036 Chromosome and associated proteins [BR:
ngi03036
]
103739699 (Phf1)
Transcription factors [BR:
ngi03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
103739699 (Phf1)
Chromosome and associated proteins [BR:
ngi03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
103739699 (Phf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tudor_2
PHD
Mtf2_C
PHD_2
Prok-RING_1
Chromo
PHD_ash2p_like
DUF4537
ASH2L-like_WH
Zn_ribbon_CLPX_N
Motif
Other DBs
NCBI-GeneID:
103739699
NCBI-ProteinID:
XP_008838382
LinkDB
All DBs
Position
Un
AA seq
579 aa
AA seq
DB search
MAQPPRLSRSGAPSLWDPASTGPTSGPRPRLWEGQDVLARWTDGLLYLGTIKKVDSAREV
CLVQFEDDSQFLVLWKDISPAALPGEELLCCVCRSETVVPGNRLVSCEKCRHAYHQDCHV
PRAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGPYARAMLGMKLSLPYGLKGLDWDAAH
LSNRQQSYCYCGGPGEWNLKMLQCQSCLQWFHEACTQCLSKPLLYGDRFYEFECCVCRGG
PEKVRRLQLRWVDVAHLVLYHLSVCCKKKYFDFDREILPFTSENWDSLLLGELSDTPKGE
RSSKLLSALNSHKDRFISGREIKKRKCLFGLHARTPPPVEPLTGDGAPTRSLVQRGWGKS
LGFPSGQGPGGGVSRPLGKRRRPEPEPLRRRKKGKVEELGPPSAVHNQPESREQRQRARL
QRALQASVSPSPPSPNQSYQGSSGYNFRPTDARCLPSSPIRMFASFHPSASTAGTSGDNE
PPDRSPLELHIGFPTDIPKSSSHSMTASSSSVPASTPGLPRRSVPPSPLCRSLSPGTGGG
VRGGVGYLSRGDPVRVLARRVRPDGSVQYLVEWGGGGIF
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcccccccggctgagccgctctggggccccctctctctgggacccagcttct
actggtcccacctcaggccccagacctcgactttgggagggtcaagatgtgttggccaga
tggactgatggactgttgtacttgggcaccatcaagaaggtggacagtgctcgggaggtg
tgtctggtccagtttgaggatgactcccagtttctggtactatggaaagacattagccct
gccgccctccccggggaggagctcctctgctgtgtctgtcgctctgagactgtggtccct
gggaaccgcctggtcagctgtgagaagtgtcgacacgcatatcatcaggactgccatgtt
cccagggccccagcccctggagaaggagagggcacatcctgggtctgccgccagtgtgtc
tttgcaattgccaccaagaggggcggtgcactgaagaagggtccctatgctcgggccatg
ctgggtatgaagctgtctctgccctatggactaaagggattggactgggacgctgcacat
ctgagcaaccgacagcagagttactgttactgtggtggccctggggagtggaacctgaaa
atgctgcagtgccagagctgcctgcagtggttccatgaggcctgcacccagtgtctgagc
aagcccctcctctacggggacaggttctatgagtttgagtgctgtgtgtgccggggtggc
cctgagaaggtccggaggctacagcttcgctgggtggacgtggcccatcttgtcctctac
cacctcagtgtttgctgtaagaaaaaatactttgattttgaccgagagatcctccccttc
acctctgagaattgggacagtctactcctgggggagctttcagacacccccaagggagaa
cgttcttccaagctcctctctgcccttaatagtcacaaggaccgtttcatttcagggagg
gagatcaagaagcggaagtgtctctttggtctccatgctcggacccctcctcctgtggag
cctctcacaggagatggagcccccaccaggtcactggtccagaggggatgggggaagagt
ctcggcttcccttcagggcagggccctgggggaggggtctcacgtcccctggggaagcgc
cggaggccggagccagagcccctgaggaggaggaagaaggggaaagtggaggagctgggg
ccaccctcagcagtgcacaatcagccggagtcccgggagcagagacagagggcacgtctg
cagagggcactgcaggcctcagtgtctccatcaccccccagccctaaccagagttaccag
ggcagcagcggctacaacttccggcccacagatgcccgctgcctgcccagcagccccatc
cggatgttcgcttccttccacccttctgccagcactgcagggacctctggggacaatgaa
cccccagacaggtcacccctggaacttcacattggcttccccacagacatccctaagagc
tcctcccactcgatgactgcctcatcttcctcagtcccagcctctaccccaggccttccc
agacgttcagttcccccttctcccctgtgccgtagtttgtctcctgggactgggggagga
gttcgaggtggggttggctacctatcccgaggggaccctgtccgggttcttgctcgaaga
gtgcggcctgatggctctgtgcagtacctggttgaatggggaggagggggcatattctga
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