Nannospalax galili (Upper Galilee mountains blind mole rat): 103742245
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Entry
103742245 CDS
T03372
Symbol
Col9a3
Name
(RefSeq) collagen type IX alpha 3 chain
KO
K08131
collagen type IX alpha
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04151
PI3K-Akt signaling pathway
ngi04510
Focal adhesion
ngi04512
ECM-receptor interaction
ngi04820
Cytoskeleton in muscle cells
ngi04974
Protein digestion and absorption
ngi05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
103742245 (Col9a3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103742245 (Col9a3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103742245 (Col9a3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103742245 (Col9a3)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
103742245 (Col9a3)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
103742245 (Col9a3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ngi00535
]
103742245 (Col9a3)
Proteoglycans [BR:
ngi00535
]
Extracellular matrix (ECM) proteoglycans
Others
103742245 (Col9a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
103742245
NCBI-ProteinID:
XP_008841471
UniProt:
A0A8C6QH21
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Position
Un
AA seq
680 aa
AA seq
DB search
MTRAPALALLLLGQLLTATSAQKMGPRGPPGPQGPPGKPGKDGIDGDAGPPGLPGPPGPK
GTPGKPGKPGEAGLPGLPGVDGLTGRDGPPGPKGTPGERGSLGPPGPPGLGGKGLPGPPG
EAGVSGLPGGIGLRGPPGPSGLPGLPGPPGPPGPPGNPGVLPEGATDLQCPAICPPGPPG
PPGMPGFKGPAGYKGEQGEVGKDGEKGNPGPPGPPGIPGTLGLQGPRGLRGLPGPLGPPG
DRGPIGFRGPPGIPGAPGKVGDRGERGPEGFRGPKGDLGRTGPKGIPGVAGPGGEPGMPG
KDGRDGVPGLDGEKGEAGRSGAPGEKGPNGLPGLPGRAGSKGEKGELGRPGELGEAGPSG
EPGIPGDVGVPGERGEAGHRGSVGALGPQGPPGAPGVRGFQGRKGNIGDPGLPGPQGLRG
DVGDQGPGGATGPKGDQGIAGSDGLPGDKGELGPSGPIGQKGESGSRGELGPKGIQGPNG
TSGVQGVPGPPGPLGLQGVQGVPGITGKPGVPGKEASEQRIRELCGGMISEHIAQLAAHL
RKPLAPGSVGRPGPAGPPGPPGPPGSIGHPGARGPPGYRGPTGELGDPGPRGSQGDRGDK
GTAGVGLDGPAGDQGLQGPQGVPGISKDGRDGTHGEPGLPGDPGLPGAVGAQGTPGICDT
SACQGAVLGGGGEKSGPRSS
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcgctcccgctctggccctgctgctcctggggcagctcctgacggccacctcc
gcgcagaaaatgggacctcgaggcccccctggtccccaaggaccacctgggaagcccggc
aaggatggcattgatggagatgctggccctccaggtcttcctgggcctccgggccccaaa
gggaccccaggaaagccagggaagccaggagaagcaggactgccaggactgcctggtgtg
gatggtctgactgggagggatggaccccctggacccaaaggtaccccaggagagcgggga
agtctaggaccccctgggccaccagggcttgggggcaaaggcctccctggacccccagga
gaggcaggagtgagtggcctcccaggtgggattggcctgcgtggccccccgggaccctct
ggactcccaggcctgcctggacccccaggaccccctggacctcctggaaaccctggggtc
ctccctgaaggtgcgactgatctgcagtgccctgccatctgcccaccaggcccccctggg
cccccaggaatgccaggattcaaggggcccgctggctacaaaggggagcaaggagaggtt
ggcaaggatggtgagaagggtaatcctggtccccctggacctcctggaatcccgggcact
ctgggactacagggtccacgaggattacgaggacttccagggcctcttgggccccctggg
gaccggggtcccattgggtttcgggggccccctgggatcccaggagcgccaggaaaagtg
ggtgacagaggtgagaggggcccagaggggttccgtggccccaagggtgacctgggcaga
accggtcccaaaggaatccccggagtggctggacctggtggagagccaggcatgccaggc
aaggatggcagggatggagtgccaggacttgatggtgagaagggagaggctggtcgcagt
ggtgcccctggagagaagggtcccaatgggctgccaggcctccctggacgagcaggatcc
aaaggcgagaagggagaactgggtagacctggggagctgggtgaggctggcccctctgga
gagccaggaatccccggagatgttggtgttcctggggaacgtggtgaggctggtcacagg
ggctcagtgggggctcttggcccacagggccctccgggggcccctggtgtccgtggcttc
cagggccggaagggcaacataggagatcctggtcttccaggcccccaaggcctccgaggt
gatgtaggtgaccagggcccaggaggtgccacaggccctaaaggagatcagggcatcgca
ggttcagacggtcttccaggggacaaaggcgaactgggtcccagtggtcccattggacaa
aaaggagagtctggcagccgaggggagctgggccccaaaggcatccagggccccaacggc
accagtggagtccagggtgttcctggccccccaggacccctgggcctccagggtgtgcaa
ggtgtcccaggcatcactgggaagccaggagttccgggtaaggaagccagtgaacagcgc
atcagggagctgtgtggggggatgatcagtgagcacatcgcacagttagcagcacacctg
aggaagccgttagcaccaggctccgtcggcaggcctggtcccgcaggacccccaggaccc
ccaggtcctccaggttccattggccaccccggtgctcgggggccccctggataccgtggt
cccactggggagcttggagatcctggacccagaggaagccagggcgacagaggagacaag
ggcacagcaggcgttggactggatgggcctgctggggaccaggggctccaagggcctcaa
ggtgtgcctggcatcagcaaagatggtcgagacggcactcatggcgagcctggccttcct
ggtgatcctggccttcctggagctgttggagctcaggggaccccagggatttgtgacacc
tcagcctgccaaggagctgtgttaggagggggtggggaaaagtcaggtccccggagctca
taa
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