Nannospalax galili (Upper Galilee mountains blind mole rat): 103744002
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Entry
103744002 CDS
T03372
Symbol
Poll
Name
(RefSeq) DNA polymerase lambda
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03410
Base excision repair
ngi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
103744002 (Poll)
03450 Non-homologous end-joining
103744002 (Poll)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngi03400
]
103744002 (Poll)
Enzymes [BR:
ngi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
103744002 (Poll)
DNA repair and recombination proteins [BR:
ngi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
103744002 (Poll)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
103744002 (Poll)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
HHH_5
NTP_transf_2
BRCT_2
HHH
PTCB-BRCT
BRCT
PAG
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
103744002
NCBI-ProteinID:
XP_008843816
LinkDB
All DBs
Position
Un
AA seq
582 aa
AA seq
DB search
MLWIRPARICERTGSSHTSMDPKGILKAFPKRKKNPATSSSKALAKIPKREKGEAGEWLS
SLQAHIVPTGIGRARAELFEKQIVQHGGQICSAQTPGITHIVVDEKMDCERALHLLRLPQ
LPPGAQLVKSAWLSLCLQEKRLVDTAGFGISIPNRFLEQPQPSKADQDSSAPGIQEVLPR
STLSPPSKAEEAPRTQAQISSDDETSDGEGPHVSPADLEALISGRYPKPPEEDGRPDLAP
EALDKWVCAQPSSQKATNHNLHITEKLEVLAKAYNVQGDKWRALGYAKAINALKRFHKPV
SSYQEACSIPGVGKRMAEKIVEILESGHLRKLDHISDSVPVLELFSNIWGAGTKTAQMWY
HQGFRSLEDVHSLGSLTAQQAIGLKHYDDFLDRMPREEAAEIEQMVRTSAQAFNPGLLCV
ACGSYRRGKMTCGDVDVLITHPDGHSHQGIFSRLLDSLRQQGFLTDDLVSQEENGQQQKY
LGVCLLPGPGRRHRRLDIIIVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALS
AAVVRNRQGVKVAPGQVLPTPTEKDVFKLLGLPYREPAERDW
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggatccggccagcccggatctgcgaaaggacaggatccagccatacttcaatg
gaccccaagggcatcttgaaggcatttcccaagcggaagaaaaaccctgccacttcgtca
tcaaaagcacttgcaaagattcccaaaagggagaagggtgaagcaggagagtggctgagc
tccctacaggcccacattgtgcccactgggattggacgagcccgggctgaactctttgag
aagcagattgtccagcatggtggccaaatatgctctgctcagaccccagggatcactcac
attgtagtggatgaaaaaatggactgtgagcgggccctccacctcctcagactgccccag
ctacccccaggtgctcagctggtgaagtcagcctggctgagcttgtgcctgcaggagaaa
aggctggtggacacagctggattcggcatctctatccctaacaggttcttggagcaacca
cagcccagcaaagctgaccaagactcttctgctcctggcatccaggaggttctacctaga
tcaaccctctcccctccctcaaaggcagaagaggcaccaagaacccaggcccagatcagc
tcagatgatgaaaccagtgatggggaagggccccacgttagcccagctgatctggaagcc
ttgatcagtggtcgctaccccaaaccccctgaggaagatggtaggcctgatctagctcca
gaagccttggataagtgggtctgcgcgcagccctcaagccagaaggcaaccaaccacaac
ctgcacatcacagaaaagctggaagtgctggccaaagcctacaatgtccagggagacaag
tggagggccctgggctatgccaaggccatcaatgccctcaagagattccacaagcctgtc
agctcctaccaggaggcctgcagcatccctggagttggcaagcggatggctgagaagatc
gtggagatcctggagagtggacatctgcggaagctagaccacatcagtgacagcgtgcct
gtcttagagctcttctccaacatctggggagctggaaccaagactgctcagatgtggtac
catcagggcttccgaagcttggaagatgtccacagcctgggctccctgactgcccagcag
gccattggcctgaaacactacgatgactttctggaccgcatgcccagggaagaggctgca
gagattgaacagatggtccggacatcagcccaggccttcaaccctgggctgctgtgtgtg
gcatgtggctcttaccgccgggggaagatgacctgcggggatgtggatgtacttatcact
cacccagatggccattcccaccagggcatcttcagccgcctccttgacagccttcggcag
caagggttcctcacagatgacttggtgagtcaggaggagaatggccagcaacagaagtac
ttgggtgtgtgcctgctcccagggccagggcggcggcaccggaggctggacatcatcatt
gtaccttacagtgagtttgcctgtgccctgctatacttcactggctctgcccatttcaac
cggtccatgcgggctctggccaagaccaagggcatgagcctgtcggaacatgccctcagt
gcagctgtggtccggaacagacaaggtgtgaaggtggcgcctggccaagtgcttcccacc
cccacagagaaggacgtcttcaagctcttaggcctgccttaccgagagccagctgagcgg
gactggtga
DBGET
integrated database retrieval system
