Nannospalax galili (Upper Galilee mountains blind mole rat): 103744095
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Entry
103744095 CDS
T03372
Symbol
Ifih1
Name
(RefSeq) interferon induced with helicase C domain 1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
3.6.4.13
]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04622
RIG-I-like receptor signaling pathway
ngi05161
Hepatitis B
ngi05162
Measles
ngi05164
Influenza A
ngi05168
Herpes simplex virus 1 infection
ngi05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
103744095 (Ifih1)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
103744095 (Ifih1)
05171 Coronavirus disease - COVID-19
103744095 (Ifih1)
05164 Influenza A
103744095 (Ifih1)
05162 Measles
103744095 (Ifih1)
05168 Herpes simplex virus 1 infection
103744095 (Ifih1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ngi04054
]
103744095 (Ifih1)
Pattern recognition receptors [BR:
ngi04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
103744095 (Ifih1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARD_2
RIG-I_C-RD
RIG-I_C
ResIII
Helicase_C
DEAD
CARD
SWI2_SNF2
SNF2-rel_dom
DUF3638
MoCF_biosynth
Motif
Other DBs
NCBI-GeneID:
103744095
NCBI-ProteinID:
XP_008843981
UniProt:
A0A8C6QXU3
LinkDB
All DBs
Position
Un
AA seq
1021 aa
AA seq
DB search
MSNGCSSAEKSFRYLLSCFRTRVKMYIQVEPVLDYLTFLPAETKEQILRKAATCGDISAA
ELLLSTLEKGAWQPGWARMFVEALEQSGSPLAARYVNPTLTDLPSPSSEAALDECLQLLN
LLQPTLVEKLLLRDVLDTCVEKELLTAEDRNRISAAENKGNESGVRELLRRIVQKEDWFS
KFLNVLHRTGNDALFQELTGFTCSRNNADFENLSHKDGPEATESLLSTADEKEAWGTQSN
STETSFAGSSMASESDTSLAEGSVSCLDESLGHNSNMGSDSGTMGSDSDERKGMERASLE
PELQLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYITKDHLDKKREASEPGKVIVLV
NKVILAEQLFRKEFNPFLKKWYHIIGLSGDTQLKISFPEVVKSYDVIISTAQILENSLLN
LENGEDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLKNNTLKKENKPIIRLPQ
ILGLTASPGVGGAKKQSEAEKHILNICANLDAFTIKTVKVNLDQLKHQIKEPCKKFVIAD
DTREDPFKEKLLEIMTSIQTYCQMSSISDFGTQHYEQLVIQMEKKAAKEGNRKDRVCAEH
LRKYNEALQINDTIRMIDAYNHLETFYSDEKEKKFAVLEDSDESGDDGDCHGDELEDNAK
KPLKLDETDEFLINLFFENNKMLKKLAENPKYENEKLTKLRNTILEQFTRTEESSRGIIF
TKTRQSTYALSQWITENEKFAEVGVKAHYLIGAGHSSEVKPMTQNEQKEVISKFRTGKIN
LLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVTSSGSGVTERE
IVNDYREKMMYKAINRVQNMKPEEYAQEILKLQVQSILEKKMKIKRSIAKHCKDNPASIT
FLCKNCSMLACSGNDIHVIEKMHHVNMTSEFKRLYIVRENKALLKKFADYKTNGEIICKC
GQAWGTMMVHKGLDLPCLKIRNFVVVSKNNSSKKQYKKWVELPIRFPDLDCSDYCLSSDE
D
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatggatgctcttcggcagagaagagtttccgctatctcctgtcgtgcttcagg
accagggtgaaaatgtacatccaggtggagccggtgctggactacctgaccttcctgccc
gcagaaaccaaggagcaaattcttaggaaggccgccacctgcggggacataagcgcggcg
gaactgctgctgagcaccctggagaagggggcgtggcagcccggctgggctcggatgttc
gtggaggccctggagcaaagcggcagccccctggccgcgcgctacgtcaaccccacgctc
accgatctgccctccccctcctctgaggccgcgctcgatgagtgtctccaactgctgaac
ctccttcagcccactctggtggaaaagctcctccttagagatgttctggatacttgcgtg
gagaaggaactgttgacagctgaggacagaaatcggatttctgctgcagaaaataaaggg
aatgagtcaggtgtaagagaactgctacggagaattgtgcagaaagaagactggttttcc
aaatttctgaatgttcttcaccgaactggaaatgatgcactcttccaagaactaacaggt
ttcacttgctcaagaaacaatgcagattttgagaatttatcacacaaagatggccctgaa
gctaccgagtcacttttgtccacggcagatgagaaagaggcctggggtacccagagcaat
tcaacagagacctcttttgcaggttcttctatggcttcagaatcagacacaagtttggca
gaaggaagtgtcagctgcttagatgaaagtcttggacataacagcaacatgggcagtgat
tcaggcaccatgggaagtgattcagatgagagaaaggggatggaaagagcatccctagag
ccagaactgcagctcaggccttaccaaatggaagtggcccaaccagccttggaggggaag
aatatcatcatctgccttcccacagggagcgggaaaaccagagtggctgtttatatcacc
aaggatcacttggacaagaaaagagaagcatctgagcctgggaaagttattgtccttgtc
aataaggtaatattagctgaacagctcttccgaaaagagttcaacccgtttttgaagaaa
tggtatcatattatcggattaagtggtgatactcagctgaaaatatcttttccagaagtt
gtcaaatcttatgatgtgattatcagtacagctcaaatccttgaaaactcactcttaaat
ctggaaaatggagaagatgatggtgttcagttgtcagacttttccctcattatcattgat
gaatgtcatcacactaacaaagaagcagtttataacaacattatgaggcggtatttgaag
cagaagttaaaaaacaataccctcaagaaggaaaacaaaccaataattcgcctgccacag
atactaggactgacagcttcaccaggagtgggaggggccaaaaagcaatcagaagctgaa
aaacacattttaaatatttgtgccaaccttgatgcatttaccattaaaacagtgaaagtg
aaccttgatcaacttaaacaccaaataaaggaaccatgcaagaagtttgttattgctgat
gacaccagagaagacccattcaaagagaaacttctagaaataatgacaagcattcaaact
tactgccaaatgagttcgatatcagactttggaactcagcattatgagcaattggttatt
caaatggaaaaaaaagctgctaaggaaggaaatcgtaaagatcgtgtatgtgcagagcat
ttgagaaagtacaatgaagccctacaaatcaatgacaccatccgaatgattgatgcgtat
aaccacctggaaactttctacagtgatgagaaagaaaagaagtttgcagtcctggaagac
agcgatgagagtggtgatgatggtgactgtcatggtgatgaacttgaggacaatgcaaag
aaacccttgaaactggacgaaacagatgaatttctcataaatttattctttgaaaacaat
aaaatgttgaaaaagctagctgaaaacccaaaatatgaaaatgaaaaactcaccaaatta
agaaacactatattggaacaattcacaaggacagaggagtcatcacgaggaataattttc
acaaaaacacggcagagcacctatgccctttcccagtggattacggaaaatgaaaagttt
gcggaagttggcgtcaaagcccattacctgattggagctggacatagcagtgaggtcaag
cccatgactcagaatgaacaaaaagaagtcattagtaaatttcgcactggaaaaataaat
ctgcttatcgctaccacagtggcagaagaaggtctggatatcaaggaatgcaatattgtt
atccgttatggtcttgtcactaatgaaatagccatggtccaggcccgaggtcgagccaga
gctgatgagagcacctatgtcttggtaactagcagtggctccggagttactgaacgtgag
atagttaatgattaccgagagaagatgatgtataaagccataaatcgtgtccaaaatatg
aagccagaggagtatgctcaagagattttgaaattacaggtgcaaagtatactggaaaag
aaaatgaaaatcaagagaagtattgcaaagcattgcaaggacaatccagcgtcaataact
tttctttgcaaaaactgtagtatgctagcctgctcaggaaacgatatccatgtcattgag
aagatgcatcatgtcaacatgacatcagaattcaagagactctacattgtgagagaaaac
aaagcactgctaaagaaatttgctgattataaaacaaatggagagattatctgcaaatgt
ggccaagcttggggaacaatgatggtgcacaaaggcttagatttgccttgccttaaaata
aggaattttgtagtggtttcaaaaaacaattcatccaagaaacaatacaagaagtgggta
gaattacctatcagatttcctgaccttgattgctcagactattgcttatctagtgatgaa
gactaa
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integrated database retrieval system
