Nannospalax galili (Upper Galilee mountains blind mole rat): 103749024
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Entry
103749024 CDS
T03372
Symbol
Dcp1a
Name
(RefSeq) decapping mRNA 1A
KO
K12610
mRNA-decapping enzyme 1A [EC:3.-.-.-]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103749024 (Dcp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngi03019
]
103749024 (Dcp1a)
03036 Chromosome and associated proteins [BR:
ngi03036
]
103749024 (Dcp1a)
Messenger RNA biogenesis [BR:
ngi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103749024 (Dcp1a)
mRNA degradation factors
5'-3' decay
Decapping complex
103749024 (Dcp1a)
Chromosome and associated proteins [BR:
ngi03036
]
Eukaryotic type
Gene silencing
piRNA pathway
103749024 (Dcp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
103749024
NCBI-ProteinID:
XP_008850047
LinkDB
All DBs
Position
Un
AA seq
598 aa
AA seq
DB search
MALSGSRLRPRRRGSARRFKMESLSRAGQEMSLAALKQHDPYITSIADLTGQVALYTFCP
KANQWEKTDIEGTLFVYRRSASPYHGFTIVNRLNMHNLVEPVNKDLEFQLHEPFLLYRNA
SLSIYSIWFYDKNDCHRIAKLMADVVEEETRRSQQAARDKQSPSHANGCSDQRPIDILEM
LSRAKDEYERNQMGDSNISSPGLQPSTQLSNLGSTETLEETPCGSQEKSAPSGHKHLTVE
ELFGTSLPKEQPAVVGLDSEEVEKLSGDASQKEPSSFFPFPFEQSGAPQSENLGVHSTTP
HTVQPEVATPVLITPASITQSGEKHAPSYTIPLSPVLSPTLPAETPTTQVPPSLPRNSTM
MQAVKTPRQKSPLLNQPVPELSHGSLIASQSPFRAPVSLANTAGTSLPSVDLLQKLRLTP
QHDQIQTQPLGKGAVAPNFSAAGQLATPESFIEPPSKTTARAAASASLSNMVLAPLQSMQ
QNQDPEVFAQPKVLPSAIPVTGPPLVTATTTAVSSVLLSPSVFQQTVPRSTDLERKASSP
SPLTVGTPENQRKPSIVLSRSQLQDTLIHLIKNDPSFLSTLHEVYLQVLTKSKDNHSL
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggcactttccggttcacgactccgcccccgccggaggggctctgctcggagattcaag
atggagtcgctgagtcgagcagggcaggagatgagcctggcggccctgaaacaacacgac
ccctatatcaccagcatcgcagacctcacgggccaggtcgctctgtacaccttctgcccc
aaggccaaccagtgggagaagactgacatagaagggaccttatttgtctatcgaaggtca
gcttcaccttaccatggttttaccattgtcaatcgactaaatatgcacaatttggttgaa
ccagtgaataaagatttggaatttcagctccatgaaccgtttcttctgtatagaaatgca
agcttgtcaatatacagcatctggttttacgacaagaatgactgtcaccgcatagcaaag
ctcatggctgatgtggtagaagaggagacacggcgatcccagcaggctgctcgagataaa
cagagtcctagccacgccaatggctgcagtgaccagaggcccatcgacatcctggagatg
ctgagcagagccaaggatgagtatgagaggaatcagatgggcgactcaaatatctccagc
cctggattacagccaagtactcagctctccaatctgggaagcaccgagactctagaggag
acaccctgtgggtcacaggagaagtctgctccatctggacacaaacatctgacagtagaa
gagttatttggaacctctttgccaaaggaacagccagcagttgtgggtctggattcagaa
gaggtagagaagttgtcaggagatgcatcccagaaagaacccagctcattcttccccttt
ccctttgaacagtcaggagcccctcagtctgagaacctgggtgtccactccaccactccc
cacacagtccagcctgaagttgccaccccggtgctaatcactccagcctccatcacacag
tctggtgaaaagcatgccccgagctacacaattcccttgagccctgttctcagtcccact
ctgccagccgaaacccctaccacacaggttccccccagcttacctcggaacagcaccatg
atgcaagcagtgaagacgcctagacagaagtctccactcctgaaccagccagtccctgag
ctaagccacggaagtctgattgccagccagagtcctttcagagccccagtgagcctggca
aacacagctggcacatccctcccaagtgttgatctgctccagaaactcaggttgacccct
cagcatgaccaaatacagacacagccacttggaaaaggtgcagtggcacccaacttttca
gcagctggccaattggccacccctgagagcttcatagagcctccctctaagacaacagca
agagcagcagcctcagcctccctgagcaacatggtgcttgctccccttcagtctatgcag
caaaaccaggatcctgaagtatttgctcagcctaaggtgttacccagtgccatcccggtc
acaggccctccattggttactgcaacgaccacagcagtatcctcagtcctgctgtccccc
agtgtattccagcaaacagttcccaggtctacagaccttgagaggaaagcaagctcccct
tctcccctcactgttggaaccccagaaaatcagaggaagccttccattgttctcagcagg
tctcagctccaggacacattgatacatctaataaagaatgaccccagcttcctcagcaca
cttcatgaagtttacttgcaggttctgaccaagagcaaagacaaccacagcctctga
DBGET
integrated database retrieval system
