Nannospalax galili (Upper Galilee mountains blind mole rat): 108490005
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Entry
108490005 CDS
T03372
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ngi04515
]
108490005
Cell adhesion molecules [BR:
ngi04515
]
Cadherins
Protocadherins
108490005
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
VWA_3_C
Motif
Other DBs
NCBI-GeneID:
108490005
NCBI-ProteinID:
XP_017654271
LinkDB
All DBs
Position
Un
AA seq
797 aa
AA seq
DB search
METGWRGNPRQRQVLVFFVLLSVFGAGTELGPYSIEEERERGSFVANLGKDLGVELVELA
IRRARITSQGNKELLQLKVQSGDLLIDEKLDREALCGSTEPCVLHFQVLMENPLEVFQAE
LRVKDINDNSPVFTEREMTLKIPENSPLGNAFPLNNALDLDVGANDIQNYKISSNSHFLV
VTRDRSDGRKYPELVLEKELDREEEPELRLTLTALDGGSPPRSGMAQVLIEVVDTNDNAP
EFQQPMYKVQIPENSPVGSLVVTVSAGDLDSGDNGKIFYTLFQPSLDISKTLEVNSVTGE
IRLRKQVDFDTIPSYEVDIKATDGGGLSGKCTLLLQVMDVNDNPPKVMLSALTSPVPENS
PDMVVAVFSVTDPDSGNNGKMICSIQEDLPFLLKPSGKNFYTLVTEKALDREERAEYKIT
ITVTDLGTPRLKTQHNITLQVSDVNDNAPAFSQASYTMYVPENNSPALHIGTVRATDSDS
GANAQLTYSLLPPHDPHLALASLVSINADNGQLFALRALDYEALQAFEFRVGAADRGSPA
LSSQALVRVLVLDANDNAPFVLYPLQNASAPCTELLPRAAEPGYLLTKVVAVDRDSGQNA
WLSFQLLKATEPGLFGVWPHNGEVRTARLLSERDAPRHRLLLLVKDNGEPPQSASVTLHV
LLVDGFSQPYLPPPEVARQPAQPDALTLYLVIALASVSSLFLFSLLLFVALRLCRRTRPA
SLPGGSVPEGRFLGQLLDVSGAGTLSHSYQYEVCLAGDSGAGEFKFLKPIYPDIHARGSE
SSSEEKPRSEVLLFNIE
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggagacaggatggaggggaaatccgagacaaaggcaagtcctggttttctttgttttg
ctgagtgtgtttggggcgggcacggagctgggtccctattccatagaagaagaaagggag
aggggctcctttgtggcaaacctagggaaagatctgggggtggagttggtggagctagcc
attcgcagagccaggatcacatctcagggaaacaaagagcttttgcagctcaaggttcaa
tctggggacttgctcatagatgagaaactagatcgagaggcgctctgtggttccaccgaa
ccttgtgtactgcatttccaagtgttaatggaaaaccctctagaggtatttcaagctgaa
ctgagagtaaaggacataaatgacaattctcctgtgttcactgaaagagaaatgactctg
aaaataccagaaaacagtcctctaggaaatgcattccctttgaataatgctctggacttg
gatgtaggggccaatgatatccagaactataaaatcagctcaaactctcatttcctggtt
gtaacccgagatcgcagtgatggcaggaagtaccctgagctggtgctagagaaagagctg
gatcgggaggaggagcctgaactaagattaaccctgacagctttggatggtggctctcct
cctcggtctgggatggcacaagtccttatcgaagtagtggacaccaacgataatgcaccc
gagtttcagcagccaatgtacaaagtgcaaattcccgagaacagccctgtgggctccttg
gtagtcactgtgtcagctggtgacttagacagcggagataatggaaaaatattctacaca
ctctttcaaccttccctagatattagcaaaacgttagaagtaaattctgtgacaggagaa
attcggctaagaaaacaggtcgattttgatacaattccctcttatgaagtggacatcaag
gccacggacgggggaggtctttcaggaaaatgcactctcctcctgcaggtgatggatgtg
aatgataatcccccaaaagtgatgctatctgctctcaccagcccagtgccagaaaactcc
ccagatatggtagtcgctgttttcagtgtaacagatccagattcagggaacaacggaaag
atgatctgctccatccaggaagacctcccctttcttctaaaaccttcaggaaagaacttt
tacactttggtaacagagaaagcactagacagagaagaaagagccgaatacaaaatcacc
atcacagtcaccgacctgggcacacccaggctgaaaacccagcacaacataaccttgcag
gtctccgacgtcaacgacaacgcccccgccttcagccaagcctcctacaccatgtacgtc
cccgagaacaacagccccgccctgcacataggcacagtcagagccacagactcagactca
ggcgccaacgcccagctcacctactcgctgctgccgccccacgacccgcacctggccctc
gcctcgctggtgtccatcaacgccgacaacgggcagctgttcgccctcagggcgctggac
tacgaggccctgcaggccttcgagttccgcgtgggcgccgcagaccgaggctcgcccgcg
ctcagcagccaggcgctggtgcgcgtgctggtgctggacgccaacgacaacgcgcccttc
gtgctctacccgctgcagaacgcctctgcgccctgcaccgagctgctgcccagggcggcc
gagccgggctacctgctcaccaaggtggtggcggtcgaccgcgactcgggccagaacgcc
tggctgtcgttccagctgctcaaggccaccgagccaggcctgttcggagtctggccgcac
aatggcgaggtgcgcaccgccaggctgctgagcgagcgcgacgcgcccaggcacaggctg
ctgctgctggtcaaggacaatggcgagccgccgcagtcggccagcgtcacgctgcacgtg
ctgctggtggatggcttctcgcagccctacctgccgccgcccgaagtggcgcgccagccc
gcgcagcccgacgcgctcacgctctacctggtcatcgccttggcctcggtgtcttcgctc
ttcctcttctcgctgctgctcttcgtggccctcaggctgtgcaggaggaccaggccggcc
tctctgcctggcggctctgtgcctgagggccgctttctgggacagctgctggatgtcagt
ggtgctgggaccctgtcccatagctaccagtatgaggtgtgtctggcgggagactctggg
gctggggagttcaagttcttgaaaccgatttaccctgatattcatgcacgtggttctgag
agcagtagtgaagaaaagccacgttctgaggtacttttatttaacattgagtaa
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