Naegleria gruberi: NAEGRDRAFT_64978
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Entry
NAEGRDRAFT_64978 CDS
T01241
Name
(RefSeq) bromodomain-containing protein
KO
K11757
protein polybromo-1
Organism
ngr
Naegleria gruberi
Pathway
ngr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
NAEGRDRAFT_64978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngr03021
]
NAEGRDRAFT_64978
03036 Chromosome and associated proteins [BR:
ngr03036
]
NAEGRDRAFT_64978
Transcription machinery [BR:
ngr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
NAEGRDRAFT_64978
Chromosome and associated proteins [BR:
ngr03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
NAEGRDRAFT_64978
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
DUF7877
Motif
Other DBs
NCBI-GeneID:
8861271
NCBI-ProteinID:
XP_002679697
JGI:
Naegr1_64978
UniProt:
D2V7Z7
LinkDB
All DBs
AA seq
1158 aa
AA seq
DB search
MTSKKKKASSSSSTTSSSHEEESSTTKNNIMEDDAGTSSNNNNNKKHKSSKRKKNSDESV
VDEVKKTPLKVKIKLGDTETTVDPLEPEKRKKKRESKKSDQKSLVSTLITLLDKLFKADK
KQNFWYAVPEKEKQYYQVIDNPMDLSSIQAKLLLGKYSSIGKFRQDLDIIHNNAEKFNGQ
ASPIFKAAERLKSIYTKELSAYSDSDPIVTPLTNDDSTVEECMIQIIDALKYEDSYSIFH
EPVPKEVPNYYETIKKPMDFATLKKKVTDHKLSISKFEKYMLRIFSNATKFNLPDTLYYA
EAVRISKLSTELVEKLKSKFSSESKPTVTITVKEPQPEEKKEKKSKKKKEDKKVEKEEKE
KKSKKKKEKEEKKEEVKVEPIVEEPFIDLNDTGSMSDDVKTPKKSSSDKKKTPKTKSTTK
WKDRVRITDLDFPDLEDTPLYSLLELVWKKLMSIDEYLIFKDPVSKDVPNYHNTIKTPMD
LTTIKGKIDDKKYTKWREFEDDVDLVYDNCKTFNSQDSIYSKEANRQHRWFRKWKKDMVT
HFGKIEVADLSEKVVCDYFNEISVVKTHAPKYDVTLLNTMEEAEEETTLPKTSLCYHLLK
ITEELKKHDKNKYFWESVDESVHPNYSNQIKHSICLSMIASNCNNKHYKTIDQFINDIDL
LHTNTSTFFSPNSKEAKESKALLNLAKEKAQPLRIKTFKDGPTSANSSSTNTTTPKTRRE
TRASSSLLDDIDNFLDMDEKDDLLSNVKSDKKKKPLASASKPKRRRPVSTAATNPYNKDI
ELGWVPHIHNCAYWQFPSYLPDPNPENRPKSIESNHDATQSFIDPASLSSSYSRGDDESN
SSQDESAPKPKKEKKEKEKTQKITSNSSDIVIPQNISTSKTPKTTKKEKNVTIPHTPTLN
ISVPPFTSPNLFSQSATGSKSTAPPQVVHLTTVENRPLPKYSYIIKKYRQNLSINKPKID
LNQLKTMNLSDCMKLFSDDERSVSEIVEAMKQKPDTIPTDNLLYGLSGFKDISPEDDELI
QKLVKIATKDGGFKMDSHFDKASRNNSSPKASLSSKHVEKDIMDEDDDDDEDDEEEENDL
SDIEDFDEEFDHKKEKYTEEADMDDDDDEFVEGDVMERVLQDFETVTFPSTRRSTPEELF
KKVKQTLMDEGVNIFEDE
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcaagaagaagaaggcttcatcttcgtcatcaacaacatcgtcatcacatgaa
gaggaatcatcaacaacaaaaaataatattatggaggatgatgcgggtacttctagtaat
aataacaacaacaagaaacacaaatcaagtaaacgtaaaaaaaattctgatgaaagtgta
gtggatgaagtaaaaaagacacctctcaaagtgaaaattaaactgggtgatactgaaaca
acagtagatcctctcgaacctgaaaagagaaagaagaagagagaatctaaaaaatccgat
caaaaatcacttgtttcaacacttattacccttttggacaaacttttcaaggcagataag
aaacagaacttctggtatgctgttcccgaaaaagaaaaacagtactatcaagtcattgat
aatcctatggatttatcttcaattcaagcaaaattacttcttggaaagtactcttcaatt
ggtaaatttagacaagatctagacattattcacaacaatgcagaaaagtttaatggacaa
gcttccccaattttcaaggctgcagaaaggttgaaatcaatttatacaaaagaactttca
gcttactccgattcggatccaatagtaacacctctcacaaatgacgatagtacagtagaa
gaatgtatgatacagattatagatgctcttaaatatgaagattcttattccattttccat
gaaccagtcccaaaggaagttccaaattactatgagactatcaaaaaaccaatggatttt
gccactttgaagaagaaggtgacagatcataagctttccatttctaagtttgaaaagtac
atgttacgtattttttctaatgcaacaaagttcaaccttccagatactctctactatgca
gaagctgtaagaatttcaaaactttctactgagctggtagagaagcttaaatcaaaattc
tcctctgaatcaaaaccaactgtcactatcactgtaaaggagccgcaaccagaagagaaa
aaagagaaaaagtcaaagaaaaagaaagaagacaaaaaagtcgagaaggaagaaaaagaa
aagaaatcaaagaaaaagaaagaaaaagaagaaaaaaaggaagaagttaaagtagaacct
attgtagaagaaccttttattgatttgaatgatacaggatctatgagcgacgatgttaaa
acacctaagaaatcttcctctgataaaaagaaaactcctaagacaaaatcgactacaaaa
tggaaggatcgtgtacgtattacagacttagattttccagatttggaggacacacctttg
tattctcttcttgaattagtttggaaaaaactaatgtctatagacgaatatttaatattt
aaagatcctgtatccaaagatgtaccaaattaccataatacaattaaaaccccaatggat
ttaacaaccattaagggaaaaatagatgataagaaatatactaagtggcgagaatttgaa
gatgatgttgatcttgtatatgataattgcaaaacttttaactctcaagattctatatat
tcaaaagaagctaacagacagcatagatggttcagaaaatggaagaaagatatggtgact
cactttggcaagattgaggttgccgatctttctgaaaaagttgtttgtgactattttaac
gagatatctgttgttaagacacacgcaccaaagtatgatgttactcttttgaatacaatg
gaagaagcagaagaggagacaacattaccaaaaacttctctttgctatcaccttctcaaa
attacagaagagcttaaaaaacacgacaagaacaaatacttttgggagagtgttgacgaa
agcgttcatccaaactatagtaaccaaatcaaacattctatttgtttatcaatgatagcc
agtaattgtaacaacaaacattacaagactattgatcaatttattaatgatattgatctc
ttacatactaatacttctactttcttctctccaaactctaaagaagcaaaagaatcaaaa
gccttattgaatctggctaaagaaaaagcacaacctttgagaattaagactttcaaagat
ggtccaacttctgccaatagttccagtacaaacactacaacaccaaaaacaaggagagaa
actagggcatcaagttcacttttggatgatattgataattttcttgatatggatgaaaag
gatgatttattatctaatgtgaaatccgataaaaagaagaaacctttagcaagtgcctct
aaaccaaaaagacgaagaccagtaagcactgctgcaacaaatccatataataaggatatt
gaattaggatgggtgccacatattcataattgtgcatactggcaattcccatcctatttg
cctgatcctaatccagaaaatagacctaaatcaattgaatccaatcatgatgcaactcaa
tcattcattgatccagcatccctatctagctcgtacagtagaggtgatgatgaatcaaac
tcatctcaagatgaaagtgctccaaaaccaaagaaagagaaaaaagaaaaggaaaagact
caaaaaatcacttccaattcatccgacattgttattccacaaaacatttcaacatcaaaa
acacctaagaccaccaagaaggaaaagaatgtcactattccacacacaccaaccttaaat
atctcagttcccccattcacctcaccaaatttattctctcaatcagccactggttctaaa
tcaactgctccacctcaggttgtacatttaactactgttgaaaatagaccacttccaaag
tattcctatatcatcaaaaagtatcgacaaaatttatctattaacaaacctaaaattgat
ttgaatcaactcaagactatgaatctttcggattgtatgaaactcttctcagatgatgaa
agatcagtttctgaaatcgttgaagcaatgaaacaaaaaccagataccataccaacagat
aatcttttatatggactttcaggctttaaggacattagcccagaagatgatgaactcatt
caaaagttggtcaagattgctaccaaagatggaggattcaagatggattcacactttgat
aaggcttcacgtaataattcttcaccaaaagcttcactttcatcaaaacatgttgaaaag
gacatcatggatgaagatgatgacgacgatgaggatgatgaggaagaagaaaatgatttg
tctgacattgaagattttgatgaggaattcgaccataagaaggaaaagtacacagaagaa
gctgatatggatgatgacgacgatgaatttgttgagggtgatgttatggagagagttttg
caagattttgaaacagttaccttcccaagtactagaagaagtactcccgaagaattgttc
aagaaggtcaaacaaacactcatggatgaaggtgttaatatctttgaagatgaataa
DBGET
integrated database retrieval system
