KEGG   Naegleria gruberi: NAEGRDRAFT_78856
Entry
NAEGRDRAFT_78856  CDS       T01241                                 
Name
(RefSeq) hypothetical protein
  KO
K12827  splicing factor 3A subunit 3
Organism
ngr  Naegleria gruberi
Pathway
ngr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ngr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    NAEGRDRAFT_78856
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ngr03041]
    NAEGRDRAFT_78856
Spliceosome [BR:ngr03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    NAEGRDRAFT_78856
 Complex B
    NAEGRDRAFT_78856
 Complex C
   U2 SnRNP specific factors
    NAEGRDRAFT_78856
SSDB
Motif
Pfam: SF3a60_Prp9_C SF3A3 SF3a60_bindingd PRP9_N DUF6323
Other DBs
NCBI-GeneID: 8848961
NCBI-ProteinID: XP_002680050
JGI: Naegr1_78856
UniProt: D2V746
LinkDB
AA seq 516 aa
MSSSLMIEQTRLAHTDVEQAIKSVIYEIKHKARTQKHIVYQNHRINYHIEQIQQKSNYLL
TTCYGQTSEACNTGVYDSNTPQIQSMKNQITETTQPNTINSFYSKLEEIKDYHRRFAVKI
ENRNTSESNDEQAQRKVKQRVQQEIKVLFTDEELYGRYVDLNAHYNAFVDLINEQNSTAT
PPVEHKTIDYVEYLVTLGQFDKLSLDLKNQEKYKSYLESLLDYFIDFMNRTQPLMGIKQM
VDKLEEEFDTKCTSGDLPEHWKFLVKLMEKSQPEKDQPTSEQNSSAQGKKKKRRGGKRKS
NHNVDKLRSIALMEYKISKFLTEWLSDVIQQTKIYVEKKSTRTWEENQAEMERIEKQMDK
EDDDEQQEQQKKANSAIDPNDPLSKYASKKNNPLNLPIGPDGKPIPYWLYKFQGLGNEYI
CEICGNHSYWGHKEFEKHFQEWRHANGMKILGIPNTRHFHHITKIKDAVELWKSMQNQDQ
QQSWDQSEMEEVEDAEGNVYTKQTYLDLKKQGVIKH
NT seq 1551 nt   +upstreamnt  +downstreamnt
atgtcctcatcgttgatgattgagcaaacacgtcttgctcacacggacgtcgaacaagcc
atcaaatctgtaatttatgaaatcaaacacaaagctagaacacaaaaacatattgtatat
caaaatcatcgtataaattatcatattgaacaaatacaacaaaaatctaactatttatta
acaacttgttatggacaaacatccgaggcttgtaacactggtgtttatgattctaataca
ccacaaatacaatctatgaaaaatcaaatcactgaaacaactcaaccaaacacgatcaac
agtttttattcaaagttggaagaaatcaaggattaccacagaagatttgctgttaaaatt
gagaatagaaatacttctgaatccaatgatgaacaagctcaaagaaaagtcaagcaacga
gttcaacaggaaattaaagttttgttcaccgacgaagaattatatggaaggtatgtcgat
ttaaatgctcactataacgcattcgtagacctgattaatgaacagaattccacagcaact
ccacctgttgaacataaaactattgactatgtggaatatcttgtcactttaggtcaattt
gacaaattgtcactagatcttaaaaatcaggaaaaatataagagttatttggaaagtctt
ttggattactttattgattttatgaatagaactcaacctcttatgggcatcaaacaaatg
gttgataaattggaagaggaattcgacacaaagtgtactagtggtgatttgcctgaacat
tggaagttcttggttaaattgatggaaaagagtcaaccagaaaaagatcaaccaacatct
gagcaaaattcatcagcacaaggtaaaaagaagaagagaagaggaggtaaaagaaagagc
aatcacaatgtagataaactaaggtcgatagcattaatggaatacaagatttccaaattc
ttaacagaatggctatctgatgtaatacaacaaactaagatttatgtggagaaaaagtca
accaggacatgggaagaaaatcaagctgaaatggaaagaattgaaaagcaaatggacaag
gaggatgacgacgaacaacaagaacaacaaaagaaggccaatagtgcaattgatcctaat
gatccactcagtaaatatgccagtaagaagaataatcctttgaacttgcctattggtcct
gatggtaaacctattccatattggctctataaattccaaggcttgggaaatgaatacatt
tgtgaaatatgtggtaatcactcatactggggacataaggaatttgaaaaacacttccaa
gagtggagacatgctaatggtatgaaaattctaggaattccaaacactagacatttccat
cacattacaaagatcaaagatgctgtggaattatggaagagtatgcaaaatcaagatcaa
caacaaagttgggaccaatcagaaatggaggaagttgaagatgctgaaggaaatgtctac
accaaacaaacctatctcgaccttaagaaacaaggtgtcattaaacattaa

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