Neoarius graeffei (lesser salmon catfish): 132867105
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Entry
132867105 CDS
T10798
Symbol
rnf6
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngra04121
]
132867105 (rnf6)
Enzymes [BR:
ngra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132867105 (rnf6)
Ubiquitin system [BR:
ngra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132867105 (rnf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF6_N
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_11
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-RING_4
zf-RING-like
zf-P11
Prok-RING_4
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
132867105
NCBI-ProteinID:
XP_060755825
LinkDB
All DBs
Position
19:complement(20729574..20735654)
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AA seq
683 aa
AA seq
DB search
MDPPGGRDERRRQAERLRREEAYYHFINELSEEEYRLMRDSNLLGTPGEVTAEELRQRLD
GAKERVSSQPRSESRPQNSEAGQEGSSAAAEPGAESTNGDSLLEWLNTFRRTGNATRSGQ
SGNQTWRAVSRTNPNSGEFRFSLEININHEQPEPGEHSDASDPVELPVPQRASASIRTPP
RPAPYSTQHPSSYSTTRPTLGRRAQARRTRSSTTPPITPPLISQAPYTNLRRNLALPHPA
SLPPPPPPPPPPPPSQATPTSLPQEQDSINSVQGQVQLQPPLLSNEEEQEANDAPDCPEA
ASQASVQGATANREARRTRSRGRVRRIALSRSSRRSRSPLDRNSARSSSPTPSNSAPAIE
STGNTAAAAAVEMVEVPAEPTAPVESAPEVATEEGETPASGAAGGVRRHPTIMLDLQVRR
IRPGENRDRDSIASRTRSRARAAENTVTFESDSGGFRRTISRSERAGIRTYVSTIRIPLR
RISETGLGEPSSTALRSILRQIMTGFGELSSLMETEADPEGSAPGQNVGVNAASQTQRAQ
GGEATTGNAVTDSGRESGAVGEAGQVRVGTNGRDTNNLVENGTLPILRLAHFFLLNDEED
DEHPRGLTKEQIDNLATRTYGQASLEGEQGRACSVCINEYAQGNKLRSLPCAHEFHIHCI
DRWLSENNTCPICRQPILSSHQD
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggaccctcccggcgggcgagatgagcgtcgccgtcaggctgagcgtcttcggcgggag
gaggcatactaccacttcatcaacgagctcagtgaggaggagtatcggctcatgagagac
agcaacctgctgggcacgccaggtgaagtcacagctgaggagctgaggcagcgtctggat
ggagccaaggagcgcgtgtcctcgcagcctcgctctgaatcacgtccacagaacagtgag
gcgggacaggagggcagcagtgctgccgctgagccgggggccgagagcaccaacggtgac
tctctgctggagtggctgaacacgttccggcgcacgggcaacgccactcgcagcggccag
agcggcaaccagacgtggcgcgctgtcagccgcacgaatccgaacagcggcgagtttcgc
ttcagcctggaaatcaacatcaaccacgagcagcccgagccaggggaacacagcgacgct
tctgaccctgtcgaacttcctgttccgcagagggcctctgcatctatacgcactcccccg
aggcctgcgccctattccactcaacacccctcctcttattctacaaccaggcccactctg
gggaggcgggctcaagccaggcgcacccgcagtagcactaccccacccataaccccgcct
ctgatctcacaggcaccgtatacgaatttgagaaggaaccttgctttgcctcacccagca
tcgcttcctcctcctcctcctcctcctccccctccccctccttcacaggccacgcctaca
tccttgcctcaagagcaggatagtattaacagtgtgcagggtcaagtccagctgcagcct
cctttactgagtaatgaggaggagcaggaagctaatgatgctccagactgtccagaagct
gcgtctcaggccagcgtgcagggggcaacagctaatcgtgaggcacgcagaactcgttcc
cgtggccgggtccgccggatagctctgtcccggtcctcacgccgtagccgctcacctctg
gatagaaactctgcccgaagctctagccccacccccagcaacagtgctcctgcgatagag
tccaccgggaacacggcggctgctgctgctgtggagatggtggaagttcctgctgagccg
acggcaccggtggaatccgcccctgaagtggccactgaggaaggtgagactcccgcatca
ggcgcagcaggaggcgtccgccggcacccaactatcatgttggatttgcaggtgcgccga
atccggccaggcgagaaccgagaccgggatagcatcgccagccgcacacggtctcgtgcc
cgcgctgctgaaaatacagtcaccttcgagagtgacagcggcggcttcagacggaccatc
tcgcgctcagaacgtgcaggcatccgcacttacgtaagcactatccgcattcctctgcgc
cgcatctcagagacaggtctgggcgagccgagttccacagcgctgcgctccatcctgcgg
cagatcatgaccggtttcggagagctcagctctttaatggagaccgaggcagacccggaa
ggctccgctcctggacagaatgtaggagtcaacgctgcatctcagacccagcgtgcgcag
ggtggtgaagccacgacagggaacgctgtaaccgattcgggacgagagagtggagcagtg
ggtgaggctggccaggtgagggtgggcactaacggacgggacacgaataacctggttgag
aacggcaccttgcctatcctgcggctggcgcatttcttcttgctgaacgacgaggaggac
gacgagcacccacgcggtctcaccaaagagcagatcgacaatctggccacgcgcacctat
ggccaggcgagcctagagggcgagcaggggcgtgcctgcagtgtgtgcatcaatgagtac
gcccagggcaacaagctgcgcagccttccctgcgcacatgagttccacatccactgcatc
gaccgctggctctcggagaacaacacgtgccccatctgcaggcagcccattctgtccagc
catcaggactga
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