Neoarius graeffei (lesser salmon catfish): 132871293
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Entry
132871293 CDS
T10798
Name
(RefSeq) LOW QUALITY PROTEIN: semaphorin-4E-like
KO
K06521
semaphorin 4
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ngra04090
]
132871293
CD molecules [BR:
ngra04090
]
Proteins
132871293
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
I-set
Ig_3
Ig_2
ig
V-set_CD47
Microp_apicomplexa
Sema4F_C
Motif
Other DBs
NCBI-GeneID:
132871293
NCBI-ProteinID:
XP_060761393
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Position
23:complement(39636026..39660666)
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AA seq
704 aa
AA seq
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MLFLIIILCVLGTNVLTAGRVWPLDSTPRKTISLSSDRGHVFQEEGVWNYSTMLLREDTG
VLILGARETIFALDLTNITHKKAMVKWEVTPDMRKTCSYKGKSLETECHNYIRILHKMPD
GRMYVCGTNAFNPTCDLMSYTDGNLTLENRQHNGRGKCPFDPFQRYASELVDGELYSATS
VNFLGSDMAVMRSLNYTVRSDYSSACVKDPIFIGMKHVAEGKENPEGDDDKIYIFFSETA
VEYDSYSKIQVSRVARICKGDRGGKWLLYKKWTSFLKARLDCPVPQSKLPLIIQDVFLFC
PGPWRTCMFYGVFTPQTSTSQFSAVCAFRIQDIREVFSEGKFKTLYNNYPVRQWVTYNGE
VPDPRPGACINNNARQKGFSKSADLPYKTLQFARDSPLMDQAVTPSSHRPLLVKKGAAFT
RIVVASTTALDGSSHQVMFIGTASGSVLKAVDYNGEMVIIEEMQLFKHSEPVKILRLSTT
TGQLYAGSEAAVVQVPLSACGHYISCMDCVLARDPYCGWDFSSDSCIAINNTHQETHSEV
IQSLRDGNATRCPPFESTKTIKNFQPGSTVELQCQPGSNWAQVKWLVNNHPVKNSNMHRI
QHNSLLILTATGSDMDHYTCTSEETFNGKTYTTQIIKYELRLEDFTGPPSIQPVVEKQQN
TPLYSQVLVIIPIFMLFAPVSWYFYKRTRGHPDRAHLDVRSHCK
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcctcatcatcatcttgtgtgtattgggtacaaatgtactgactgctggccgg
gtttggcctttggacagcacaccacggaaaacaatttctttgagcagtgacagaggacat
gtttttcaagaggaaggagtgtggaattactccaccatgctcctgagagaagacactggt
gtgctcatcctgggagctcgagagaccatctttgccctggacctcacaaacatcacccac
aagaaggctatggtaaagtgggaggtgactccagatatgcggaagacatgttcatacaaa
gggaaaagtttggagaccgagtgtcataattacatccggatccttcataaaatgccagac
ggcaggatgtatgtgtgtggtaccaatgctttcaatccaacctgtgatttaatgtcttat
acagacggcaacctgactctggaaaatagacaacataatgggaggggaaagtgcccattt
gatcctttccagagatacgcctctgaacttgttgatggagagctgtactctgctacatct
gtgaatttcctgggctcagacatggctgtgatgcgaagcttaaattacactgtacgatct
gattactcgtctgcttgtgtcaaagaccccattttcattggcatgaagcatgttgctgag
ggaaaggaaaacccagagggggatgatgacaagatttacatcttctttagcgaaacagct
gttgagtatgactcctacagtaagatccaagtgtcaagggtggcccgcatctgtaagggg
gatagaggaggaaagtggctactgtataagaagtggacttcatttctaaaggctcgtctg
gactgtcctgtccctcaaagcaaattgcctttaattatacaggatgttttcctcttctgc
ccaggcccctggagaacctgtatgttctatggagtcttcactcctcagacgagcacatca
cagttctctgcagtgtgtgcctttcggatacaagacatcagggaagtgttctctgaaggc
aaattcaaaactctgtacaataactatcctgttagacaatgggtgacgtacaacggagaa
gtgcctgacccccgtcctggagcttgtatcaacaataacgcaagacagaaagggttttcc
aagtctgcggatttgccgtataaaacccttcagtttgccagagacagccccctgatggat
caggcagtgactccgtcctctcaccggcccctactggtgaagaaaggagctgcatttaca
cgtatagtggtggccagcactactgccctggatgggagcagccatcaggtcatgtttatt
ggcacagcaagcggttcagtgctgaaagcagtcgactataatggagagatggtgatcata
gaggagatgcagctctttaaacattctgagccagtgaagatactgcgcctctccaccacc
acgggtcagctgtatgcaggctccgaggcggcagtggtgcaggtgccgctgagtgcatgt
ggccattacatctcctgtatggactgtgtgctggccagagacccgtactgtggctgggac
ttctcctccgacagctgcattgctataaacaacactcaccaagagacacacagtgaggtg
attcagagtctgagagatggaaatgctacacgttgtcctccattcgagagcacaaagacc
attaaaaacttccagccgggtagtacggtagagttgcagtgccaacctggatcaaactgg
gctcaagtgaagtggcttgtcaacaatcatccagttaaaaactccaacatgcaccgcatt
caacacaacagcctgttgatcctcactgccacaggcagcgacatggaccattacacctgc
acctctgaagagaccttcaatggcaaaacgtataccacccaaattattaaatatgaactg
aggctggaggacttcacggggcctccttcaatccagccagtggttgagaaacagcagaac
acccctctgtactcccaagttctagtcatcatcccaatatttatgttatttgcgcctgtg
tcatggtacttctacaaaaggacccgcggccaccctgacagagcacatctggatgtcagg
agccactgcaaatag
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