Neoarius graeffei (lesser salmon catfish): 132871752
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Entry
132871752 CDS
T10798
Symbol
capn1
Name
(RefSeq) calpain-1 catalytic subunit isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04141
Protein processing in endoplasmic reticulum
ngra04210
Apoptosis
ngra04217
Necroptosis
ngra04218
Cellular senescence
ngra04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132871752 (capn1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
132871752 (capn1)
04217 Necroptosis
132871752 (capn1)
04218 Cellular senescence
132871752 (capn1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
132871752 (capn1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ngra01002
]
132871752 (capn1)
Enzymes [BR:
ngra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
132871752 (capn1)
Peptidases and inhibitors [BR:
ngra01002
]
Cysteine peptidases
Family C2: calpain family
132871752 (capn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_8
EF-hand_7
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
132871752
NCBI-ProteinID:
XP_060762255
LinkDB
All DBs
Position
1:94522023..94591006
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AA seq
704 aa
AA seq
DB search
MEPIYATGMAAKLRSQWDRNEGLGQNHKAVKFLGQDYDLLKAQCLQRRTLFEDSYFPTSA
SSLGFNELGPRSSKTHGVRWMRPPELSSRPQFIMDGATRTDICQGALGDCWLLAAIASLT
LNDNLLHRVVPHGQSFSDDYAGIFHFQFWQFGEWIDVVIDDRLPVKDGKLLFVHSAEGGE
FWSALVEKAYAKLNGCYEALSGGSTSEGFEDFTGGVTEMYELNKAPADLFNIIRRAVERG
SLLGCSIDITSTRDMEAVTFKKLVKGHAYSVTGVEEVVFRGSPTKLVRIRNPWGEVEWTG
AWSDNAREWDSVDSSTRSKLQNRSEDGEFWMSFSDFLREFSRLEICNLTADALEASQVKK
WSTSLYGGEWRRGSTAGGCRNYPTTFWLNPQFKINLKHPDTAGQDKCTFLVALMQKDRRK
QRKEGKDMETIGFAIYEVPNEYVGQSGVHLKQDFFLTHASSARSELFINLREVSSRFRLP
AGEYIVVPSTFEPQKEADFVLRVFSEKPADSEELDDEIKANLPTENYLDESQIDAGFKNL
FRQLAGSDMEISVKELQTILNRIISKHKDLKTDGFSQEACRSMISLMDKDGSGKLGLAEF
HVLWEKIKQYLEVFRKFDVDKSGTMSSYEMRMALESAGFKLNNHIFQLIILRYTEQDLTV
DFDNFVTCLVRLETMFKTFYTLDTDSDGFISLNFSQWLTLTMFA
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggagcccatttatgctaccggaatggcagccaagctgcgcagtcagtgggaccgaaat
gaaggcttgggccagaaccataaggctgtcaagtttttggggcaagattatgatctgcta
aaggcacagtgcctccagaggaggaccttgtttgaggattcttacttcccaaccagcgcc
tcctcactaggctttaatgagctcgggccccgctcctccaaaacgcatggtgtgcgctgg
atgaggccaccggagctcagctctcgtccccagttcatcatggatggagccactcgcaca
gatatctgtcagggagcactgggtgattgttggctgctggctgctattgcttctctcact
cttaatgataacctgctgcaccgtgtggttccacatggacagagcttcagtgacgactac
gctggtatctttcacttccagttctggcagtttggtgagtggattgatgtggtgattgac
gacaggctgccggttaaagacgggaagttgctgtttgtgcactctgcagagggcggcgag
ttctggagcgctctggtggaaaaggcctacgccaagttgaacggctgctatgaggctcta
tcaggtggcagtacatcagaaggctttgaggacttcacaggcggtgtgacggagatgtat
gagctgaataaagctccagcggatcttttcaacatcataaggagggccgtggagagagga
tcactgctgggctgctccatagatatcaccagtactcgtgacatggaggccgtcactttc
aagaaactggttaaaggccatgcctactcagtgaccggagtggaggaggtggttttcaga
ggaagccccaccaagctggtgcgcatcagaaacccctggggagaggtggagtggactgga
gcctggagtgataatgcgagagagtgggacagtgtggactcgtccaccaggagcaaactg
cagaaccgcagtgaagatggagagttctggatgtcgttcagtgacttcctgcgggagttc
agcaggttggagatctgtaacctgacagcagatgctctggaagccagtcaggtgaagaag
tggagcacgtctctctacgggggcgagtggaggagaggcagcacagctggaggctgcagg
aactacccaactacgttttggctcaaccctcagttcaagattaacttgaagcacccggat
acagcaggacaggacaagtgcaccttcctagtggctctgatgcagaaagaccgcaggaaa
caacgcaaagagggcaaagacatggagactatcggcttcgcaatatacgaggttcccaat
gagtatgtaggtcagtcaggagttcacctgaagcaagatttcttcctcacacatgcctcc
agcgctcgctctgagcttttcatcaacctgcgtgaggtcagctcacgcttccgccttcct
gctggagaatacatcgtcgtcccgtccacgttcgagccacagaaagaggccgactttgtg
ctgcgtgtcttctctgaaaaacccgctgactcagaggaactggatgatgaaatcaaagct
aatcttcccacagagaattatctggatgagagccaaattgatgccggattcaagaatctc
ttcagacagctggcaggatcggacatggagatcagtgttaaagagctccagaccattctg
aacagaatcatcagcaagcataaggatctgaagacggacggctttagccaggaggcgtgc
cgcagtatgatcagcctcatggataaagatggcagtggtaagctgggtctcgcggagttc
catgtgctgtgggagaaaatcaaacaatatctggaagtgttcaggaagtttgatgtggac
aagtctggcacaatgagctcctatgagatgcgtatggcccttgaatcagcaggcttcaag
ctgaacaaccatatattccagctgattattctgcgctacacagagcaggacctgaccgtc
gacttcgacaacttcgtcacctgtctcgtgcgcctggagaccatgttcaagacattttac
accttagacactgacagtgatggattcatctccttaaacttcagccagtggctcactttg
accatgtttgcataa
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