Neoarius graeffei (lesser salmon catfish): 132876020
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Entry
132876020 CDS
T10798
Symbol
ubb
Name
(RefSeq) LOW QUALITY PROTEIN: polyubiquitin-B
KO
K08770
ubiquitin C
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03320
PPAR signaling pathway
ngra04120
Ubiquitin mediated proteolysis
ngra04137
Mitophagy - animal
ngra04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132876020 (ubb)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132876020 (ubb)
04137 Mitophagy - animal
132876020 (ubb)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
132876020 (ubb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngra04121
]
132876020 (ubb)
Ubiquitin system [BR:
ngra04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
132876020 (ubb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
132876020
NCBI-ProteinID:
XP_060769209
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All DBs
Position
28:15082435..15115108
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AA seq
1077 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPS
DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF
VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
STLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK
QLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD
KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGQXISPLKAFKTKL
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaaaaccctgactggcaagaccatcacccttgaggttgagcccagt
gacactattgagaatgtcaaggccaaaatccaagacaaagaaggcattcctccagatcag
cagaggctgatctttgctggcaagcagctggaagatggccgcaccctgtctgactacaac
atccagaaggagtccaccctccacctggtgctccgccttaggggtggtatgcagatcttt
gtgaagaccctgactggcaagaccatcaccctcgaggttgagcccagtgacaccattgag
aatgtcaaggccaaaatccaagacaaagaaggcattcctccagatcagcagaggctgatc
tttgctggcaagcagctggaagatggccgcaccctgtctgactacaacatccagaaggag
tccaccctccacctggtgctccgccttaggggtggtatgcagatctttgtgaagaccctg
actggcaagaccatcaccctcgaggttgagcccagtgacaccattgagaatgtcaaggcc
aaaatccaagacaaagaaggcattcctccagatcagcagaggctgatctttgctggcaag
cagctggaagatggccgcaccctgtctgactacaacatccagaaagaatccaccctccac
ctggtgctccgcctcaggggtggcatgcagatctttgtgaagaccctgactggcaagaca
atcacccttgaggttgagcccagtgacaccattgagaatgtcaaggccaaaatccaagac
aaagaaggcattcctccagatcagcagaggctgatctttgctggcaagcagctggaagat
ggccgcaccctgtccgactacaacatccagaaagaatccaccctccacctggtgctccgc
ctcaggggtggcatgcagatcttcgtgaagaccctgactggcaagaccatcacccttgag
gttgagcccagtgacaccattgagaatgtcaaggccaaaatccaagacaaagaaggcatt
cctccagatcagcagaggctgatctttgctggcaagcagctggaagatggccgcaccctg
tccgactacaacatccagaaagaatccaccctccacctggtgctccgcctcaggggtggc
atgcagatcttcgtgaagaccctgactggcaagaccatcacccttgaggttgagcccagt
gacactattgagaatgtcaaggccaaaatccaagacaaagaaggcattcctccagatcag
cagaggctgatctttgctggcaagcagctggaagatggtcgcaccttgtctgactacaac
atccagaaggagtccaccctccacctggtgctgcgtctgaggggtggaatgcagattttt
gtaaagaccctgactggcaagaccatcacccttgaggttgagcccagtgacactattgag
aatgtcaaggctaaaatccaagacaaagaaggcattcctccagatcagcagaggctgatc
tttgctggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaggag
tccactctccacctggtgctgcgtctgaggggtggcatgcagatctttgtgaagaccctg
actggtaagaccatcacccttgaggttgagcccagtgacaccattgagaatgtcaaggcc
aaaatccaagacaaagaaggcattcctccagatcagcagaggctgatctttgctggcaag
cagctggaagatggccgcaccctgtctgactacaacatccagaaggagtccaccctccac
ctggtgctgcgtttgaggggtggtatgcagatctttgtgaagaccctgactggcaagaca
atcacccttgaggttgagcccagtgacactattgagaatgtcaaggctaaaatccaagac
aaagaaggcattcctccagatcagcagaggctgatctttgctggcaagcagctggaagat
ggccgcaccctgtctgactacaacatccagaaggagtccaccctccacctggtgctccgt
ctgaggggtggtatgcagatcttcgtgaagaccctgactggcaagaccatcacccttgag
gttgagcccagtgacaccattgagaatgtcaaggccaaaatccaagacaaagaaggcatt
cctccagatcagcagaggctgatctttgctggcaagcagctggaagatggccgcaccctg
tctgactacaacatccagaaggagtccaccctccacctggtgctgcgtttgaggggtggt
atgcagatcttcgtgaagaccctgactggcaagaccatcacccttgaggttgagcccagt
gacaccattgagaatgtcaaggccaaaatccaagacaaagaaggcattcctccagatcag
cagaggctgatctttgctggcaagcagctggaagatggccgcaccctgtctgactacaac
atccagaaggagtccaccctccacctggtgctgcgtttgaggggtggtatgcagatcttt
gtgaagaccctgactggcaagacaatcacccttgaggttgagcccagtgacactattgag
aatgtcaaggctaaaatccaagacaaagaaggcattcctccagatcagcagaggctgatc
tttgctggcaagcagctggaagatggccgcaccctgtctgactacaacatccagaaggag
tccaccctccacctggtgctccgtctgaggggtggtatgcagatcttcgtgaagaccctg
actggcaagaccatcacccttgaggttgagcccagtgacaccattgagaatgtcaaggcc
aaaatccaagacaaagaaggcattcctccagatcagcagaggctgatctttgctggcaag
cagctggaagatggccgcaccctgtctgactacaacatccagaaggagtccaccctccac
ctggtgctccgtctgaggggtggtatgcagatcttcgtgaagaccctgactggcaagacc
atcacccttgaggttgagcccagtgacaccattgagaatgtcaaggccaaaatccaagac
aaagaaggcattcctccagatcagcagaggctgatctttgctggcaagcagctggaagat
ggtcgcaccttgtctgactacaacatccagaaggagtccactctccacctggtgctgcgt
ctgaggggcgggcagtaaattagtccacttaaggcatttaagacaaaattgtag
DBGET
integrated database retrieval system
