Neoarius graeffei (lesser salmon catfish): 132883205
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Entry
132883205 CDS
T10798
Symbol
limch1a
Name
(RefSeq) LIM and calponin homology domains-containing protein 1a isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
Domain-containing proteins not elsewhere classified [BR:
ngra04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
132883205 (limch1a)
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GFIT
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NCBI-GeneID:
132883205
NCBI-ProteinID:
XP_060772516
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Position
3:24923585..25093215
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AA seq
1835 aa
AA seq
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MASAAEEGSSPGPEHHEATECSSGPAFQEAQKWIEAVTGRTFGEKDFRSSLENGILLCEL
LSSIKPGLVKKINRLPTPIAGLDNLTMFLRGCEELGLKGSQLFDPGDLQDMSIRANLTFT
VQTRSHGITFYRDSDCSRKLKNVLITIYWLGKAVNGYASYSGPTLDLKEFEGLLSMMRKE
CVNEEPDSPKRSVRDSGCVDNWESEHSDSLSPPRHRREDSFDSLDSFSSQSQPTPSSDTV
VRANSDDLEGDHRKLPDVRKDDMSARRVSYKEPRAVLPFNQYLPNKSNQSTYVPAQLKKR
RSELEEEQRSGSNSTSPIREECVGISSETPLVLSSQKTVTWAVVGEAEPQLDEAELKKMK
KLEKAGIKVLPAHVRYSSPKVTTVELDQGKSPSPDIIPQCDNDFLRAEHTHERDKEDDED
KEGDRKVPDIQKDDLASRRARMNQPKRSVAHQFLPSSCSRKDRERWEGIRLSSQHAMLEM
LEKMEQEKKSESDTTSTDVSIVTRKDNPFLSAHRKKKGEEDKSDDEEDTGKSVIPNIQKD
DLARRRTQIGSLPQRDFRQSLVQTSITQSDLEKWQRLSMTIENSEDAPVEVSVITRKDNP
FLSTEKARQKEDDEDDQSETEGGRQAALPNIQKDDLARRRGQTGLLPHRDHQQSLAQAAM
TQSDLEKWQRLQMSTENSSSTPTSPLKSSQRSLSDPKHPLTLAEREALELRLAEKARDEK
EYEEQEEAEEKERQPDLKKDDMMARRTGVFQKASVKVHNQFLPMPRSKKETHPDELVQKD
SKSVSRDPFLDRNIKTKRFKVGQRVEHVKPEPKVPSSATQKEPEVLGSILIHAEVHCDSY
NYPDNDDEYNNRSPLPNLDKDDMLARKTGSYQKPSGNQFNAFLPKPGGVNGKKKSVSGQC
QSNLKTSGQEKKNTQESNHGYNLSPTPRSVTPPPADVDDIPRKCPQILDVQKADTVGMMD
GEIDVVGGAQAQSPLPLPDPDTQHTCCLDDDVFPLTFSHKASSVSDETESISLIDMRDEE
EDVDSLSPHGQTRHERLHNQYNKLKEEEDHWQDDLARWKNRRRSASQDLIRKEEERKMME
KLMTSEGGSHRRKSIKTYKEIVEEKERREQELHELYCQASTPEEKAAILQRYALRFTISD
AILEKLQLPKLPSVAKLQSAYTLSEEAEISESPSLTEIETDSSSQYLKEITHTVMHSHIN
SPDLSPIQDSKTPEIPLSPARDSNTPEVQLSPARDSNTPEVQLSPARDSNTPEAQLSPAR
DSNTPEVQLSPVRDSNSPEVPLSSVQESKTPDVSFSPSCDSKILEAPISPIRTIKTPEVS
VSPVRIPPAPSRPVPLLTPKPYSQPKFNQASFKQVKTDGLMRVNGDSIVEDTRESPVRPV
SFTPTPPKPASQSPPQMSEISAGSETTVQECTQTPPVQKTEHVKEENNSHGSPLKRSSTE
DKTSKTLMDSEITEKQTIPDTAVKHNCVVKTTIVTELRETHSLPTTDAPIADQMSCSDGL
GQKSDEISFTESRKADITSYSEGFDFTSECIETPILNLAKRVNHWTWDPNEERKRQERWQ
QEQERLLQEKYQQEQERLKQEWEKAQREVEEEERKHHEEEQRILEETVTPLTPHSSSGVT
EAPPTSTVPHNTIVLSLADWERKQEMLEKDTKVNQRNGLEQRSDETEAASPPQQNDERAE
HQENQSATPQLQFTEDESRSCKSESRQEWKKTASLDRNVSLSQNQPPRMRRSGSYEHILG
IHTSPSSLDTSSSSSDRSVSAKRLCSSCAQPLGKGAAMIIDTLGLCFHVQCFKCGVCKGL
LGDTSTGTDVRIRNGVLNCHSCYMKSRAAGQPTTL
NT seq
5508 nt
NT seq
+upstream
nt +downstream
nt
atggccagcgctgctgaagagggttccagtcccgggccggagcaccacgaagccaccgag
tgcagctcaggaccagcttttcaggaggcgcagaaatggatagaggcagtgacagggaga
acatttggtgagaaggatttcagaagcagcctggagaatggtattctactttgcgagttg
ctgagttccatcaaaccaggacttgtaaagaagattaacagactgccaacccccattgca
ggactggataatctcaccatgttcctgaggggatgtgaggagttgggactaaagggatca
caactgttcgacccaggagacctgcaggacatgtctatacgcgccaacctaacgtttacc
gtccaaacgagatcacatgggattaccttttacagggattcagattgcagtcggaagctg
aagaatgtgctgatcactatttactggttgggcaaagctgtaaatggttatgcatcatat
agtggtccaacgcttgacctaaaagagtttgaaggccttttgtccatgatgaggaaggag
tgtgtgaatgaggagcctgactcccctaagcgcagtgtacgggacagcggatgcgtggac
aattgggagtcggaacactctgattcgttgtcacctccgagacatagacgagaggattcc
tttgacagtctggactccttcagctctcagtcacagcccacaccttcttctgatactgtg
gtccgtgctaacagtgatgatttggagggagatcacaggaagctgccagatgtgcgaaag
gatgacatgtccgcccgccgtgtctcctataaagagccccgtgctgtgctgccttttaac
cagtacctccccaacaagagtaatcaaagcacctatgtgcctgctcagctgaagaagagg
aggagcgaacttgaagaagaacaaaggagtggcagcaactccacgtcccccattagagag
gagtgtgttggcatttcgagcgagacgcctcttgtcctcagttcccagaaaactgtgacc
tgggcagttgtgggagaggcagagcctcagctggatgaggcagaactaaagaagatgaaa
aagttagagaaggcgggtattaaagtgttgcctgcacatgtgcgatacagcagtcctaag
gtgaccactgtagagctcgatcagggtaaatctccgtctcctgacatcatccctcaatgt
gataacgacttcctgcgggctgaacacacccatgagagggacaaagaggatgatgaggac
aaggaaggagatagaaaggtcccagatatccaaaaggacgaccttgcttcccggagggcg
cgcatgaatcaaccaaaacgcagtgtcgcgcatcagttcctgccaagctcgtgcagcagg
aaggaccgcgagcgttgggagggaatccggctttcctcccagcatgctatgttggagatg
ttggagaaaatggagcaggagaagaagagtgaatctgacaccacctccactgacgtgtcg
attgtaactcgcaaggacaaccccttcctaagcgcccacaggaaaaagaagggtgaggag
gacaagagtgatgatgaggaggacacagggaagtcagtcatcccaaacatacagaaggat
gatcttgccaggaggcgaacgcaaattgggtccctcccacaaagggattttcgccaatca
ttggtccagacaagtatcactcagtcagatcttgagaagtggcagagactttcaatgacc
attgaaaacagtgaggacgctccagttgaagtgtcagtcataactcgtaaggacaacccc
ttcttgagcaccgagaaagcaagacagaaagaagatgatgaggatgatcagagtgagaca
gagggaggcagacaggctgctttgcctaatatacagaaagatgatctggctaggaggcgg
ggtcagactgggctcctcccacatcgggatcatcagcagtcattggctcaggcggccatg
acgcagtcagacctggagaagtggcagagactgcagatgagcacagagaacagctcaagc
acaccaacctcacccctcaagtcctcgcagcgttctctttctgaccccaaacaccctttg
acccttgctgagcgtgaagcacttgagctgcggctggctgagaaggcgagggatgagaag
gagtatgaggaacaggaagaggcggaagagaaagaaagacagcctgacttaaagaaggat
gacatgatggcccggcggactggagtgtttcagaaagcgagtgtaaaagtgcataatcag
ttcctcccaatgcctcgctctaagaaagaaacacatccagatgaattggttcagaaagac
agcaagagtgtatccagagatccgttcttggatagaaacataaaaacaaagcgattcaaa
gtgggacaaagagttgaacatgtaaaacctgagccaaaggtcccatcatctgccactcaa
aaggagccagaagttcttggttcaattttgatccatgctgaggttcactgtgacagttac
aattatcctgataatgatgatgagtacaataatagaagtcctctccctaacttggataaa
gatgacatgcttgcaaggaagacaggctcataccaaaaaccaagtgggaatcagtttaat
gcctttctgcctaaacctggaggtgtcaatggcaaaaagaagtctgtgagtgggcaatgc
cagtcaaacctcaaaaccagtggacaagaaaagaaaaacactcaggagagtaaccatggc
tacaatctcagccccacccctagatctgtgaccccgcccccagcagatgttgatgacatt
cccagaaaatgccctcaaattctggatgtacagaaagcagacactgtgggcatgatggat
ggggaaattgatgttgtgggcggggcccaggcacaaagccctttacctttacctgaccct
gatacacagcacacgtgttgcttagatgatgatgttttccccctgacattcagtcacaag
gcttctagtgtttctgatgaaaccgaaagcatcagtttgattgacatgcgtgacgaagag
gaggatgtggactcgctgtcaccacatggccaaacacgacacgagaggctgcacaaccag
tacaacaaactcaaagaggaggaagaccattggcaggatgatctagctcggtggaagaat
cgaagacgcagtgcctctcaggacctgatcaggaaagaggaagagaggaagatgatggaa
aaactgatgacctcggagggaggttctcatcgcaggaagagcatcaaaacttacaaagag
attgttgaggagaaggagcgtcgagagcaagagctgcacgagttatactgccaagcctcg
actcctgaagagaaagcagccatattgcagcgctatgctctccgtttcaccatcagcgac
gccatattggagaaactccagcttccaaaactcccttctgtcgcaaaactccaatctgca
tacaccctgagcgaagaagccgaaatttccgagtctccatcactcactgaaatagaaaca
gattccagtagccagtatcttaaagagataacacacactgtaatgcacagccacatcaac
tctccagatttatcacctatccaagactccaaaactccagaaattcccctctcaccagca
cgagactccaacactccagaagtccaactttctccagcacgagactccaacactccagaa
gtccaactttctccagcacgagactccaacactccagaagcccaactttctccagcacga
gactccaacactccagaagtccaactttctccagtccgagactccaacagtccagaagtc
ccactgtcttcagtacaagaatccaaaactccagacgtctccttctcaccttcctgtgac
tccaaaatcttagaagcccctatttctcctatcagaacaatcaaaactcctgaggtttct
gtctcgcctgttcggataccccctgcgccatccagacctgtgccattactaacaccgaaa
ccatacagccagcccaaatttaatcaggcttcttttaagcaagttaagactgatggactg
atgcgtgtgaacggtgactccattgtcgaggacacaagagagagtccggtgagaccggtt
tccttcaccccaacaccaccaaaaccagcaagtcagagtcctccgcaaatgtcagaaatc
tcagcaggaagtgaaaccacagtgcaggagtgcactcagaccccacctgttcaaaaaacc
gaacatgttaaagaagagaacaacagtcacggcagtcctcttaaaaggagtagtacagag
gacaagacttccaaaactctcatggattcagaaataacagagaaacagacaatccctgat
acagcagtgaagcacaactgtgtggtgaagacgaccattgtgacagagcttcgagaaaca
cactcactccctacaacagatgctcctattgctgaccagatgagctgttctgatggatta
ggccagaaatcagatgagatttccttcactgagtccagaaaggctgatattacgtcttac
tcagagggatttgacttcaccagtgaatgtatcgaaaccccaatcttgaaccttgcaaag
agggtcaatcactggacttgggaccctaacgaagagcgtaaacggcaggagaggtggcag
caggagcaggagcgcctgctacaggagaagtatcagcaggaacaggagagactgaagcag
gagtgggagaaagctcagcgcgaggttgaagaagaagaaaggaaacaccatgaagaggag
caacggatcttggaggaaacggtgaccccactgaccccacactcatcctctggtgtgaca
gaagctccacctacttccacagtccctcataacaccattgtgttgtcattggctgactgg
gagaggaagcaggaaatgctggagaaagacaccaaggtgaaccagagaaatggtttagaa
cagaggtctgatgaaacagaagcagcgtcgcctccacaacagaacgatgaaagagcagaa
catcaggagaatcagtcagctacaccacagctgcagttcacagaggatgagtctcggagc
tgcaaatcagagagcagacaagagtggaaaaaaacagcctccctggaccggaatgtgagc
ctttcacagaatcagcctcccaggatgaggaggtctgggtcgtacgaacacattttaggg
atacacacatctccatcatcactagacacatcatcctcatcttcagacaggtcagtgagt
gcaaagaggctgtgctccagctgtgcacagccactggggaaaggagccgcgatgatcatc
gacactttgggcctttgcttccacgtccagtgttttaagtgcggtgtgtgtaaagggctg
cttggtgacacgagcacaggaaccgatgtccggatccggaacggtgttctcaactgtcat
tcatgctacatgaaatcacgtgctgctggtcaacccactacgttataa
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