Neoarius graeffei (lesser salmon catfish): 132885922
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Entry
132885922 CDS
T10798
Name
(RefSeq) terminal nucleotidyltransferase 4A-like
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132885922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngra03019
]
132885922
03016 Transfer RNA biogenesis [BR:
ngra03016
]
132885922
Enzymes [BR:
ngra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
132885922
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
132885922
Transfer RNA biogenesis [BR:
ngra03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
132885922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
TUTase
Motif
Other DBs
NCBI-GeneID:
132885922
NCBI-ProteinID:
XP_060776438
LinkDB
All DBs
Position
5:complement(24076106..24168664)
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AA seq
756 aa
AA seq
DB search
MDPRVTWVQPELKGPANAFWMHIWETSLGLRTTDTLHSPCLYPAMALGSVKTNSSSCISP
HPVQVSPSFILSPPFDHWNQTALNGTYTRVGEPSASPQNGSLSPLSSSLDSESDSPKSDS
CDSTNTHHPHPRLFFSFSERLHHVNDCLHQHQQHHVHLHTHLHQYHHHRHLSQQCPQAPD
HNYHPVRKKDESKASTNGVNYPLSTSNGNLLWTGMPWKTGRYSPGVNGLHEEILDFYAFM
SPRPEEEAMRRDVVSRIESVIKNLWPAADVQIFGSFSTGLYLPTSDIDLVVFGKWERPPL
QQLDQALRQQNLAQPFSIKILDKATVPIIKLTDRETEVKVDISFNVETAVKAARFIKDQL
KKYTVLPHLIFVLKQFLLQWDLNEVFTGGISSYCLILMAISFLQLHPRIDCRAVNINLGI
LLIEFFELYGRHFNYLKTGIRVKNGGAYLAKDEMMKALSSGHRPSLLCIEDPNIPGNDVG
RSSYGALQVKRVFDYAYVVLSHAVSPLARSYPNKDNDGTLSRILRLTQEMINYREWIIQK
WGDRHNARINCCMVQFGGDSEEQQRDSVSPQSADSLMCLSSPQQHSSSSSASSVSSLSLS
DNDSDSIPSGYKVLHQTFPAYPVPTTQQRPQNGTNLFETTSCNGQVRKPLPVSLPPPVPG
RPLCVDGCVPLNNGYRLSSPIYLGPLPGLLHHPKKFGPKIPSGFEPASMSAPRASLLQHN
RNTWHRGGKRCSLASADRTVTGQRRCFVGHSLPLLL
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggaccccagggtgacttgggttcagcccgagctgaagggaccagcaaatgctttctgg
atgcacatctgggaaacctcacttggtttacggactacggataccttacacagcccttgt
ttgtacccggccatggcgctgggttcggtgaaaaccaactcctccagctgtatcagcccg
catcctgttcaggtttcgcccagtttcattctctcacctccatttgatcactggaaccag
actgcactgaatggcacttacacaagagtcggggagcccagtgcttctccccaaaatggg
tccctgtctccattgtcctcctcgctggactccgagagtgacagtcccaaatcggactcg
tgtgacagtacaaacacccaccacccccatcccagactctttttcagcttcagtgagcgg
ctgcaccacgtcaatgactgtttgcatcagcaccaacagcaccatgtgcatctccacact
catcttcaccagtaccatcaccaccggcatctgtcccagcaatgccctcaagcgcctgac
cacaactaccatccagttaggaagaaggacgagagcaaggccagcactaatggggtcaac
tatccgctctccacctccaatggaaatctcctctggactgggatgccgtggaagaccggg
agatatagtccaggggtgaacggccttcatgaagagatactggacttctatgccttcatg
tcaccacggcctgaggaggaagccatgaggagggatgtagtgagccgcatcgagagtgtg
atcaagaacctgtggcctgcagcggacgtccaaatatttggcagctttagtactggactt
tatctgccaacaagtgacattgacctggtggtgtttgggaagtgggaacgtcctcctcta
cagcagctcgatcaggctctgagacagcagaaccttgcccaaccattctccattaaaata
ctggacaaagccacagttccgataatcaagctgactgaccgagagacggaggtgaaggtg
gacatcagttttaatgtggagacagctgtgaaagcggcacgcttcatcaaagaccaatta
aagaagtacacagtgcttccacacctgatcttcgttttaaagcagttcctgctacagtgg
gatttaaacgaggtgtttactggaggcatcagctcttactgcctcattttaatggccatc
agcttcctgcagctccacccccgtattgactgcagggcagtcaacataaacctgggcatc
ttgctgattgaattctttgagctgtatggccgccacttcaactacctgaaaactgggatc
cgtgtgaagaatggaggcgcataccttgccaaggacgagatgatgaaggccctgagcagt
ggccacagaccctcactactgtgtattgaagatcccaacataccgggcaatgatgtgggc
cgcagctcttatggagccctccaggtgaagcgggtgtttgattatgcctacgtcgtcctg
agtcatgctgtgtctcctcttgcccgctcttatcccaacaaggacaatgatggcacactc
agccggatcctcagactgacccaagaaatgattaactacagggagtggatcatccagaag
tggggagaccgacacaacgccaggatcaactgctgcatggtccaatttggaggcgactct
gaggagcagcagagagactcggtgtcgccacaaagtgctgattcccttatgtgtctctcc
agtccccaacagcactcctcatcatcttcagcctcatctgtttcctcgctctcattaagt
gacaatgactctgactccattccatctggatataaagtgctgcaccaaactttcccagca
tatcctgtgcccaccactcagcagaggccacaaaatgggacaaatctgtttgaaaccact
tcctgtaatggacaggtgaggaagcctctccctgtatcgctacccccacctgtgccaggc
agaccactgtgtgtagatgggtgtgtgccactgaacaatggctacaggctgtcctcaccc
atctatcttggcccactccccggcctcctgcaccaccccaagaagtttggcccaaagatt
cccagtggctttgagcctgcctcgatgtctgcacctcgagccagccttctacagcacaac
cgaaacacatggcaccgaggaggaaaacgctgctctctagcctcagcagataggactgtc
acaggtcaaaggagatgttttgttggccacagccttcctctcctactctag
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