Neoarius graeffei (lesser salmon catfish): 132887762
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Entry
132887762 CDS
T10798
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46 isoform X1
KO
K12590
exosome complex component RRP46
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132887762 (exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngra03019
]
132887762 (exosc5)
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
132887762 (exosc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
132887762
NCBI-ProteinID:
XP_060779352
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All DBs
Position
6:complement(17279718..17296546)
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AA seq
232 aa
AA seq
DB search
MKHAVMELDSSNPVLREFGSEQSLLSKPDGSATFMQGDTSVLVGVYGPAEVKVNKEIYDR
ATLEVLIQPKAGMPSVRERTREQCVRETCEAALLSTLHPRSSLTLVLQVVHDDGSLLACC
LNAACMALMDAGLPMSCLFCGVTCAIDAENRIITDPTAQQEKESRALLTFAIDSKEHNVM
MSSTKGSFSVKEVSMKFGECPSVLVLCRTTLTTFTFCKARHFNIGVCWYQLS
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgaagcacgctgtgatggagctggacagcagtaatccagttttgagggaatttggtagc
gagcagagtttattatccaaacctgacggttcagccacgtttatgcaaggagacaccagt
gtgttggtcggagtgtacggaccagctgaggttaaagtgaacaaggagatctatgatcga
gcgactttggaggttctgatccagcccaaagccggcatgccaagtgtccgggagcgtaca
agagagcagtgtgtgcgggagacgtgtgaagccgctctgctgtccactctccatcctcgc
tcttcgctcacactcgtcctgcaggtggtgcacgatgacggatcgttgttagcgtgctgt
ctgaatgctgcctgcatggcgctgatggacgctgggctgcccatgagctgcctgttctgt
ggagtcacatgtgccatcgacgccgagaaccgaatcatcacagaccctacagctcaacag
gaaaaggaaagtcgagcactactgactttcgcaatcgatagtaaagagcacaatgtcatg
atgtcatcaacaaaaggttctttctcagtgaaagaggtgagtatgaagtttggtgaatgt
ccttctgtgctggtcttatgtagaacaacactgacaaccttcacattttgcaaagctcga
cattttaatattggagtatgctggtaccagttatcataa
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