Neoarius graeffei (lesser salmon catfish): 132887972
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Entry
132887972 CDS
T10798
Name
(RefSeq) nuclear pore complex protein Nup93-like isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132887972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngra03019
]
132887972
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132887972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
132887972
NCBI-ProteinID:
XP_060779797
LinkDB
All DBs
Position
6:52036912..52064317
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AA seq
757 aa
AA seq
DB search
MALTNFLKLGKRKECVGCSRTLLLAICTYTDRLRHGGFLRNERENALLSAIEESRRRTFL
LAEEYHRESMLVQWEQVKQRVLHTLLGAGEDALDFSQDVEPSFISEVGAPGRSALDSVEV
AYGRQIYVFNEKVVNGHVQPNLGDLCASVADSLDDKNVSDMWLMVKQMTDVLLVPAKDTL
KSRVSVEMQMAFVRQALTFLESSYKKYTMMTVFGNLHQAQLGGVPGTYQLVHSFLNIKLP
GPMPGMQDGEVEGHPVWAVIYYCLRCGDLAAAMQVVNRAQHQLGDFKTWFQEYMNSPDRR
LAPATENKVRLYYRCVLRNSTDPYKRAVFCLIGKCDIADNHGEVADKTEDYLWLKLSQVC
FDEDGSSSPQDRLTLAHLQKQLLEDYGESHFSASQQPFLYFQVLFLTAQFEAAIAFLFRV
ERLHSHAVHVALALYELKLLLKSSGQSAQLLSQEPGDPPMVRRLNFIRLLMLYTRKFEAT
DPREALQYFYFLRNEKDNQGENMFMRCVSELVIESREFDMLLGRLEKDGSRKPGVIDKFA
GDTRAIIAKVASEAENKGLFEEAVKLYELGKNPDKVLELMNKLLSPVIAQVSAPQSNKER
LKNMALGIAERYRNNGIAGEKSVDGTFYLLLDLMTFFDEYHAGHIDRAYDVMERLKLVPL
SQDQVEERVAAFRNFSDEVRHNLSEVLLATMNILFTQYKRLKGVTAGTPGRQQRTLEDRD
SVLRSQARALITFAGMIPYRMAGDTNARLVQMEVLMN
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgaccaacttcctgaagctagggaagaggaaggagtgtgtcgggtgcagccgc
acactgctcctggctatatgcacctacactgacaggctgaggcacggcggctttctgagg
aatgagagagaaaatgcactgctgtccgctattgaggagtctcgccgcaggaccttcctg
ctggcggaggagtatcatcgtgagtccatgttggtgcagtgggagcaggtgaagcagaga
gtgctgcacaccctgctgggagcaggcgaggatgcactggacttcagccaggatgtagag
ccgagttttataagtgaagtaggagctcctggacgcagcgctctggacagtgtggaggtg
gcttatgggcgacagatctacgttttcaatgagaaggttgtaaacggacacgttcagccc
aatctgggagacttgtgtgcatcagtagctgacagtctggatgataagaatgtttctgac
atgtggctgatggtgaagcagatgacagatgtgctgctggtgccagccaaagacacactg
aagagtcgtgtctctgtggagatgcagatggcttttgtcagacaggccctgactttcctg
gagagcagctataagaagtacaccatgatgacggtgtttgggaacctgcaccaggctcag
ttaggtggcgtgcctggcacttatcagcttgtgcacagcttcctcaacatcaaacttccc
ggcccgatgccaggcatgcaggatggggaggtggagggccacccggtgtgggctgtgatc
tattattgcctgcgatgtggagacctggcagcagccatgcaggtggtgaacagagcgcag
caccagctgggagactttaagacctggttccaggagtatatgaacagcccggaccgccgc
ctggcgccagctacagagaataaagtacgactgtattaccggtgtgtgctgcgcaatagc
accgatccatacaaacgtgccgtcttctgcctcatcggcaagtgcgacatcgccgataac
cacggagaggtggctgataaaacagaagactatctgtggctcaagctgagccaggtgtgt
tttgatgaagatggaagcagctccccacaggacagactcactctggcccacttacagaag
cagctcctggaggactacggcgagtctcatttctcagccagtcagcagccgttcctttac
ttccaggtgctttttctgactgcgcagttcgaggcagcgatagcgttcctcttccgcgtg
gagcgtctacacagtcacgctgtgcacgtggccctcgccctctacgaacttaaactgcta
ctcaaatcatcaggacagagcgcacagctattgagtcaggaaccaggagatccccccatg
gtacggcgactaaacttcatccgcctcctcatgctctacactcgtaaatttgaggccacg
gacccacgagaggctctgcagtacttctacttcctgcggaatgagaaagacaaccaagga
gagaacatgttcatgcgctgtgtcagtgagctggtcattgagagtcgtgagtttgacatg
cttctgggaaggctggaaaaagacggaagcagaaagcctggcgtgattgacaagtttgcc
ggagacacgcgagccatcatcgccaaagtggcctcagaggccgagaacaagggcctgttt
gaggaagctgtcaaactctatgagctaggcaagaaccctgataaagtgctggaactgatg
aataagttgctgagtccagtaattgcccaagtcagcgcaccacagtcgaataaagagaga
ctcaagaacatggcgctgggtatcgctgaacggtaccgcaataatggtatagctggagag
aagtctgtggatggtaccttttacttgctcctggacctcatgaccttcttcgatgaatac
catgcgggccacattgaccgtgcatatgacgtaatggagaggctaaagctggttcctttg
agccaagaccaagtagaggagagggtagcagcgttcaggaacttcagtgatgaggtcaga
cacaatttatccgaggtgcttcttgccactatgaacattctgttcacacagtacaagcgt
ctgaagggcgtgacagcaggaactccgggcagacaacagcgcacactggaggaccgagac
tcggtcctgcgcagccaggcccgggcactgatcacttttgctgggatgatcccgtaccgc
atggccggagacaccaatgccaggctggtacagatggaagtcctgatgaactga
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