Neoarius graeffei (lesser salmon catfish): 132888243
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Entry
132888243 CDS
T10798
Symbol
cngb1a
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
132888243 (cngb1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ngra04040
]
132888243 (cngb1a)
Ion channels [BR:
ngra04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
132888243 (cngb1a)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
RVT_thumb
Motif
Other DBs
NCBI-GeneID:
132888243
NCBI-ProteinID:
XP_060780303
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All DBs
Position
6:21977072..22177621
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AA seq
1324 aa
AA seq
DB search
MFSWVVKVVPQPPEKPAKLDEECKGKVSPAKPKEGEVSAENSTQSGVLTWISHGLSTALP
HPVATPKTDRAESDTKVCNTFQKKTGMINWIVQELGKVVPQLDDKHKQQTGSQEVTEVPQ
VVPEVKVEHTEIKEVKEVKEVKEDAEPPPQVPAVEVVASAEPEGDKSLTPSVMEWIKQGF
EKVVPQPGHSPSVTDTSDKKEPATDPAPQPPKAPELPAAEDTTESANVVGWIVQGLGRIM
PQPVLKPKEDTSDTVQSICILQENLVLEENLVLERDMVLEEVDSDLEQQQVDQGCLLDAE
LVNQAEAQVEDQICPLLDVLHNTTPNISVTQQEDAETQTECWTPLIENIRREAEEAALVS
IQERLERERLETARIAEELARQAAELAVRQLEEEHTVVRVTEPEHLSEPDNGEQLSNIQE
EENEDDPELQLLREENEEDGRESNNAEADIKRCLVDVCPVEELETHKTEITEKIPQKEDS
PEPLPPKKSTPASQPELGYTPSLESAVQPEPNGEDHARAKSPSPIVSPGATIRPEIAASS
SSPPAIIQEDGALKEECGEEVHDGSIPTVPQILEPQESNGVTLTVPVPAMASQSKAVHTE
KVPKPDKQVEEGEMEKAGDLTPQQGLLTVEEDNSERPLSSASQTSIVVNERLQELIKLFK
ERTERTKERLIDPDESEEESPSATPTKKAAAPPPPPPPPPEEQKDVPAGEDSEEEQFLEF
MGYQVKVPKMPPMPDWLRAIMEYRFPSSFDPYTDMTYVVWLFFVMCAWNYNVWLIPVRWA
FPYQTPENIHLWLLADYLCDTVYILDIVVFQPRLQFVRGGDIVCDKKDMREQYMKTERFK
MDIISLFPLDILYYFTGVKSILRFPRILKYMAFFEFNDRMESVMKKAYIYRVIRTSLYLL
YSLHCNACLFYWGSDYEGLGSTKWVYDGRGNSYIRCYYFAVKTLITIGGLPDPTTVFEIV
FQLVNYFVGVFAFSIMIGQMRDVVGAATAGQAYYRSCVDSTVKYMTAYRIPREVQNRVKT
WYDYTWQSQGMLDEQELLIQLPDKMRLDIAVDVNYSIVSKVALFQGCDRQMIFDMLKRLK
SVVYLPGDYVCKKGEIGREMYIIKAGEVQVVGGPDGKTVFVTLRAGSVFGEISLLAVGGG
NRRTANVVAHGFANLFILDKKDLSEIMVHYPESQKILRKKAKKMLTKDKKPPEEKSLGKE
PGQVIPVRPETPKLFKAALVVGKGETFVKLKETYKDTGAIPKVLITAASTIAPSVPPPSP
IHRRSPIQRTVTQDDDDLVAQTTDSTVIIRVTPHQHGEEILSVEMAEEEDGKAEMTEQEE
KKEE
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atgtttagttgggtggtgaaagttgttcctcaacccccagagaagcctgcaaagctagac
gaggaatgcaaaggcaaagtcagtcctgcgaagccaaaagagggtgaagtctcggctgaa
aacagtactcagagtggtgtattgacctggatctctcatggtttgagtactgccctcccc
caccctgtagcaacacctaaaacagacagagcagagagtgataccaaggtctgcaacaca
ttccagaaaaagacaggcatgataaactggattgtgcaggagttaggcaaagtggttcca
caacttgatgacaagcacaaacaacagacaggctcccaggaggttactgaggttccacaa
gtggtgccagaggtaaaggtggagcacactgagattaaagaggttaaagaagttaaagaa
gttaaagaggacgctgagcctccacctcaagtccctgcagtggaggtggttgctagtgca
gaacctgaaggagacaagtccttaactccaagtgtgatggagtggataaaacaaggattt
gagaaggtggttccacagccaggacactctccatctgttacagacacttctgataaaaag
gaacctgctacagatcctgcacctcagcctccaaaggcacctgaactcccagcagctgag
gacacaacagagagtgcaaacgtggttggctggattgtgcagggactcggtcgcattatg
ccacagcctgttctgaagccaaaagaggacacttcagatacagttcagagcatctgcatc
ctgcaggagaacctagtgctggaggagaacctggtgctggagagggacatggtgctggag
gaggtggactcagacttggagcagcagcaggtggaccagggctgtttgcttgatgccgag
ctggtgaaccaggctgaagctcaggtggaggatcagatttgccccctgctggatgtcctg
cacaataccacacctaatatctcagtgacacagcaggaggatgctgagacacaaacagag
tgctggactcctctaatagagaacattagacgtgaggctgaagaagctgccctggtctct
atacaagagaggctggagcgtgagcgtctggaaacagcaaggatagcggaggagttggca
cgccaggctgctgaactggcagtgagacaactggaggaggaacacactgtagtcagagtc
acagagccagaacatctatctgaaccagacaatggagagcaactctccaacatccaggag
gaagagaacgaagatgacccggagttacagctgctgcgtgaggagaatgaggaagacggc
agggagagtaataatgctgaagcagacattaagaggtgtctggtggatgtgtgccctgtt
gaggagcttgaaacacacaaaactgagattacagagaagatcccgcaaaaggaggactca
ccagagccgcttcctccaaagaaatccactcctgcaagtcaacctgagttaggatacacc
ccatcactagagtcagctgtccaaccagaacccaatggagaagatcatgcaagagcaaag
agcccttcacccatcgtgtctccaggtgcaactattcgtcctgaaatagctgcttcaagt
tcctctcctccagctattatacaggaagatggggcccttaaagaggaatgtggagaggaa
gtccatgatggatccattcctactgtacctcaaattcttgaaccccaggagtcgaatggt
gtcaccctcacagttcctgttcctgcaatggccagccagagcaaagcagtgcacactgag
aaggttcccaaaccagacaaacaagttgaagagggtgaaatggagaaagcgggagatctg
accccccagcaaggcctcctcactgtggaggaagacaattctgagcgtcctctctcttcg
gccagtcagacaagcattgtggttaatgaacgtctgcaggagctgatcaagctgtttaaa
gaacgaacagagcgaactaaagagaggctgattgacccagatgagtctgaagaagagagt
ccctcagcaacacctaccaaaaaggctgctgctcctccgcctcctccgcctcctccccct
gaggagcagaaagatgttcctgctggtgaggacagtgaagaggagcagttcttggagttc
atgggctaccaagtcaaagtgcccaagatgccccccatgcctgactggctgagagccatc
atggagtatcgtttcccttccagtttcgatccgtacactgatatgacctatgtggtgtgg
ttgtttttcgtgatgtgtgcatggaactataacgtttggctgatcccggtgcgctgggca
ttcccataccaaactccagagaacatccacctgtggctgctagctgactacttatgtgac
actgtctacatcctggacattgtggtcttccagcccaggctacagtttgtccgtggggga
gatatagtgtgtgataaaaaggatatgagagaacagtacatgaaaacagaacgatttaag
atggacataatcagtctgtttcccctggacattctgtactatttcacaggagttaaatcc
attctgcgtttcccacgtattttaaagtatatggcattctttgaatttaacgaccgaatg
gagtcagtgatgaaaaaagcttacatttacagagtgatccggaccagcctgtacttgctc
tactcgctgcactgcaatgcctgtctgttctactggggctctgattatgaaggccttggc
tccactaaatgggtctatgatggcagaggcaacagttatatccgctgctactactttgct
gtaaaaactctgatcactatcggaggtctcccagatcccacgacggtctttgaaatcgtc
tttcagctggtcaattactttgtgggtgtgttcgcattttcgattatgattggtcagatg
agagatgttgtaggagcagctactgcaggtcaggcatactacaggtcatgtgtggacagc
acagtaaagtacatgactgcctatcgcatcccacgtgaggttcagaacagagtcaagacc
tggtatgactatacctggcaatcacaaggcatgctggatgaacaggagttgctcatacag
ctgcctgataagatgcgtctggacatcgccgtggacgtgaactactccattgtcagcaaa
gtggctctcttccaaggttgtgacagacagatgatatttgacatgttgaagagattgaag
tctgtagtctacctcccaggagactatgtgtgtaagaagggtgaaatcggcagggagatg
tacatcatcaaagctggagaagtgcaggtggttggaggtcctgatggtaaaactgtgttt
gtgactttgagggctggatctgtgtttggggagatcagcttgctggctgtgggtggaggg
aacagacgcacagctaatgtggtggcacacggcttcgctaacctcttcatcctggataag
aaggacctctctgagatcatggtgcactaccctgagtcccaaaaaatactacgcaaaaag
gccaagaagatgctaacgaaggacaagaagcctccggaggagaaaagtttaggaaaggaa
cctggtcaggtgatcccagtgcgtccagagactcccaaactgtttaaggctgccctggtg
gtgggcaaaggagaaacatttgtcaaactgaaggagacctataaagacactggagccata
ccaaaggtgcttatcacagcagcgtccaccatagcaccgtctgtaccccctccctctccc
attcaccgtcgctcacccatccagcgcacagtcactcaggatgacgatgacctggtggca
cagaccacagacagcacagtgatcatccgcgtaaccccacaccaacatggagaggagatc
ctcagtgttgaaatggcagaggaagaagatggtaaagctgagatgactgagcaggaggag
aagaaagaagaatag
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