Neoarius graeffei (lesser salmon catfish): 132891512
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Entry
132891512 CDS
T10798
Name
(RefSeq) E3 SUMO-protein ligase RanBP2-like isoform X1
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03013
Nucleocytoplasmic transport
ngra03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132891512
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
132891512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngra03019
]
132891512
03110 Chaperones and folding catalysts [BR:
ngra03110
]
132891512
04121 Ubiquitin system [BR:
ngra04121
]
132891512
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132891512
Chaperones and folding catalysts [BR:
ngra03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
132891512
Ubiquitin system [BR:
ngra04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
132891512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
Zn_ribbon_RanBP
WH1
TPR_2
TPR_1
TPR_7
TPR_16
TPR_8
TPR_CcmH_CycH
TPR_14
KaiA
Motif
Other DBs
NCBI-GeneID:
132891512
NCBI-ProteinID:
XP_060785157
LinkDB
All DBs
Position
9:complement(20385764..20449938)
Genome browser
AA seq
2318 aa
AA seq
DB search
MRRSKADVERYISSVESLSPSQKEKPVKGFLFAKLYFEAKEYELAKRHVSAYLTIQVRDP
KAHRFLGQLYELEGEIEKAVGCYKRSVDLNPAQRDLVLKVAELLCSKPELDSRAEFWVEK
AAKLLPGHPAVFDLREKLLSVQGQKGWNQLYDLLQSELQLRPSDAHVNGRLVRLYCLDGR
LEEAAKHCLAVESTGVLRDSLDWYATVVQTLQEYVAQPSVSLNEKACRKFHKELLLAHSN
LLRFTLAEKDCRESVKALQNFDRAMQSLKNTALKAADELLEVFTEMRAHLYLYAGTLLLK
MAVEKEEQWRAVVNLAALCYLLAYQVPRPQKKPEKGERTSPRPLEALACYRQSQAGHMLL
NLNQETEHFVKEVVEVFGNRSGQDTLFEKLFSTQAPLDLSFIGNDIISNISTRSPDVQEL
AKGDSGSILHCGDLQHLTWLGLQWSMMGQRPAVKDWLKQLFPRLTLETFKLDTNAPESIC
LLDLEVFLCGVVFTSHTQLQETAKISASSHLHEPRCLPSQLMKLLSSERQREWWDAAYSL
IYKKAIPNTSAKLRMIVQHGLNTLRAREKHGLQPALLIHWAKHLSVMGDGVNSYYDQKEY
VGRSVHYWHVVLPLLEKIEKRCSIPEPLEPLFMHFASKDIQVSEIKGYEEEAMMAFATLL
DIEGNTEQAILKLEKLNCISSYWHLAQIYQRLSEEAGNGVGETQEMCVSFLQQFRKYLSK
IYHAGADDMEKLPVSMEEIMDLLNEVNQQLGESGEAVDGVHEGLPMTSSPHSLTDPAVAA
SQKFSMSSLAKSVLSPSKRSVFSPKTPPHWVEDHKPLLQMLCQVEALKNKVHDLRQNSSG
STESPFHRVYGGNYAAEAFQEPFSATQSFHGVPLTVATTGPSVYYNQSPAYNSQCLLRTA
ANVTPSKAPVYGMNRLPQPHMYAYQQPTHTPPLQTGACMYSQDQVFGTSIRFESPATSLL
SPYSEEYCSHVSQPSTNPALPEPGYFTKPTVIPAQSCKSSEGKSVDFKMNFGQQNPVETS
KPVTGAASQTTPTAAAFKFNSNFKSNDGDFTFSAAEVKNNSESLLGLLTSDIPPRPEGHS
TLNSQSQDPTPSHSGVFTFGSEKGFSFVDGAQGKTTFFGKPDQTFSFANVTKPVTREESE
AKCVESDDSTHVEEDEDGPHFEPIVPLPNKIDVKTGEEEEEEMFCNRAKLFRFEAETKEW
KERGIGSIKILKHKTSGKYRLLMRREQVLKICANHYITADMVLKPNAGSDKSWVWYAVDY
ADEMQKTEQLAIRFKTADEAALFKQKFEEAQKDILKQPKLQSQLNENDSKPSTFEESSRN
VDLKTLFAKKEGEWDCNVCAVRNNSSSKECVACSSPNPCGDPKAETKPDDGFKSAPAPST
GAFMFGLGGSSKDASDASFKAFGSQIPFSFKFGTPPTVTPSNQHETESGQLEQNVDLNKN
VDLKTLFAKKEGEWDCNVCAVRNNSSSKECVACSSPNPCGDPKAETKPDDGFKSASAPST
GAFMFGLGGSSKDAGDASFKAFGSQIPFSFKFGTPPTVTPSNQGETKSGQLEQNVDSNKN
VDLKTLFAKKEGEWDCNVCAVRNNSSSKECVACSSPNPCGDPKAETKPDDGFKSASAPST
GAFMFGLGGSSKDAGDASFKAFGSQIPFSFKFGTPPTVTPSNQGETKSGQLEQNVDSNKN
VDLKTLFAKKEGEWDCNVCAVRNNSSSKECVACSSPNPCGDPKAETKPDDGFKSASAPST
GAFMFGLGGSSKDAGDASFKAFGSQIPFSFKFGTPPTVTPSNQGETKSGQLEQNVDSNKN
VDLKTLFAKKEGEWDCNVCAVRNNSSSKECVACSSPNPCSDSKAETKPADGFKSAPAPST
GAFMFGLGGSSKDAGDASFKAFGSQIPFSFKFGSQAFSHSDAKRNEPSASTCVANQTKTD
AAPESTKQSASAACFIGSGFDKFIKKRGQWDCDSCLVRNEAAAVNCVSCNAPCSSRKNEA
KWDCNVCLVRNEGTSSCCVSCKSPYLNADSTQAAPASFTFSFSTDGQANHPASTGFTANF
EAGTFHFDQGKKDTPPTTQAETSSTSSKSSISMPGLTSEIKFGFKGSESKPANSEPTSVL
LNIAEQHREKEKEASSTSVQSADSPSNDDCPLIIGKQVPFSFADLAKSLQGNFQFEEDVY
KTEENDDIQFEPVVKMPEKVDLVTGEEDEECLYTIHVKLFKFDNETHQWKEQGVGNLKIL
KNNQNGRLRVLMRQEQVLKVCANHWITTTMNLKPLSGSDRAWVWLANNFSDDDPKLEQLA
AKFKTPQLAEEFKQKFEECQRLLLDIPLQTPHKLANSD
NT seq
6957 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgaagtaaggcagacgttgaacgctacatttcttcagtagagagtctctctccg
tctcaaaaagagaaaccggtgaagggatttttatttgcaaaattatattttgaagccaag
gagtatgaacttgctaaaagacacgtctcggcgtatttaaccattcaggtcagagatccc
aaagcacatcggttccttggtcaactttatgaacttgaaggagaaattgaaaaagctgtt
ggatgttacaagcgctcggtggatctgaacccagcccagcgtgacctggttctgaaagtt
gccgagctgctgtgcagtaaaccggagcttgacagcagggcagaattctgggtggagaaa
gctgccaagcttttgccaggtcaccctgccgtcttcgacctacgggagaaattgctgagt
gtgcaggggcagaaaggctggaaccagctttatgacctgctgcagtccgagctccagctg
cgtccttctgatgcccatgttaacggcagactggtgcggctctactgcttggatggacgt
ttggaagaagcagcgaagcactgcctggctgtggaaagcactggagtcttaagagacagc
ctagactggtacgccactgttgtccagacgcttcaggaatacgtggctcaaccaagcgta
tctttgaatgaaaaggcatgtcgcaagttccacaaggagctcttgctggctcatagtaat
ctcttgaggttcacacttgctgaaaaagattgcagggagagtgtgaaggcgcttcagaat
tttgaccgtgctatgcagtctttaaagaacactgccttgaaagctgcggatgagctcctg
gaggtgttcacagaaatgagagctcatctgtatctttatgctgggaccctgctgctgaag
atggctgtggaaaaggaggagcagtggagagctgttgtcaatttagcagcactctgttac
ctgctagcttatcaggttccaagaccacagaaaaagcctgagaaaggtgaacgcacgtca
ccgagacctctcgaggcattagcttgttatcgccaaagccaagcaggccacatgctgctg
aatctaaaccaggaaacggagcactttgtgaaggaggtggtggaggtgtttgggaacaga
agtgggcaggacaccctgtttgagaagcttttcagtacacaagcccctttggatctctcg
ttcattgggaatgatatcatctccaacatcagcacgcgatcaccggatgtacaagagctg
gcaaagggggacagtggttccatcttgcactgtggggatttgcaacacctgacatggctg
ggattgcagtggtcaatgatgggccagagacccgcagtgaaagactggctgaagcagctc
tttcctcgtctcactctggaaacattcaaactggacaccaatgctccggagtcaatctgt
ctgcttgaccttgaggtgtttctgtgtggtgtggtgttcacaagtcacactcagctgcaa
gaaacagcaaagatttctgccagttcacacctgcatgagcccagatgtttaccatcacag
cttatgaaactcttatcgtcggagagacagagggagtggtgggatgcagcctatagcctc
atttataaaaaagcaatacccaatacatctgctaaactgcgaatgatcgtccaacatggc
ctgaacaccctgcgagcgagagagaaacatggtcttcagcctgcgctgctcatccactgg
gccaaacatctcagtgtcatgggtgatggtgtgaactcctactatgaccagaaagaatac
gttggccgtagtgtgcactactggcatgttgtgctccctttgcttgagaaaattgagaag
agatgcagcattcctgagccccttgagccattattcatgcatttcgctagtaaggacata
caggtttctgaaattaaaggctatgaagaggaggctatgatggcattcgctactcttctt
gacattgagggcaatactgagcaggccatcttgaagcttgagaagctcaattgcatctct
tcttactggcatcttgctcagatctatcagagactctctgaagaggcaggaaatggagtt
ggggaaactcaagaaatgtgcgtcagttttctccagcagttcaggaaatacttatcgaag
atctaccatgctggtgcagatgacatggagaagctgccggtgtcaatggaggaaattatg
gacttgctcaatgaggtcaatcagcagcttggagagagtggagaggctgtggatggagtt
catgaaggacttccaatgacttcaagcccacactccctcacagatccagctgtggctgct
tcccagaagttctcaatgtcctctctggccaaaagtgtcctctctccctctaagagatcg
gtgttttctcccaaaacaccccctcactgggtggaggatcataagccacttttgcagatg
ctctgtcaagtcgaggctttgaagaacaaggttcatgatctgagacaaaattcctctgga
tcaacagagtccccatttcacagagtgtatggagggaattatgcagcagaggcatttcag
gagcccttttcagcaacgcagtcgttccatggagtgcctcttactgttgccactacaggt
ccttcagtgtactacaaccagtcccctgcatataattcacagtgccttcttcgcactgct
gctaacgtaacaccatccaaggcacccgtctatggaatgaatcgtctccctcagccgcat
atgtatgcctaccagcaaccaacacatacaccccctcttcaaacaggagcatgcatgtac
tctcaagatcaggtttttggtacctccatcaggtttgaatcaccagctacaagcttgctg
tccccatacagtgaagaatactgcagtcatgtttctcaaccatctaccaatccagcattg
ccagaacctgggtatttcactaagccaactgtaatacctgctcagtcctgtaagagcagt
gaaggcaagtcagtggactttaagatgaactttggccagcaaaatccagttgagacttct
aagccagtgactggagctgcctcccaaacaactccaacagcagctgctttcaagttcaat
tcaaacttcaaatctaatgatggtgactttactttctcagctgcagaggtgaaaaataac
agtgaaagcctcttggggcttctgacttcagatattcctcccagacctgaaggccattca
accctaaactctcagtcacaagacccaacacccagccatagtggggtctttacttttggg
agtgaaaaaggcttttcatttgttgatggcgcacagggtaaaacaactttttttggaaaa
cctgaccaaacatttagctttgcaaacgtgaccaagccagtgactagagaggaaagtgaa
gcgaaatgtgtcgaaagtgatgacagcacccatgttgaagaggatgaggatggtccacat
tttgaacccatcgttcctctgcccaataagattgatgtcaaaactggggaggaggaggaa
gaagaaatgttctgtaacagagccaaattgttccgttttgaggcagaaacaaaagaatgg
aaagaaagaggcattggatctatcaaaatcctaaagcacaaaacatcaggcaaatatcga
ttgttgatgaggagagaacaggttttaaaaatatgtgcaaatcactacatcactgcagac
atggttctgaaaccaaatgctggatctgataaatcatgggtatggtatgctgtggactat
gctgatgaaatgcaaaagacagaacagctggctattcgttttaagactgcagatgaagca
gctttattcaaacaaaaatttgaggaagctcagaaagatattcttaaacagccaaaactg
caaagtcaactgaatgaaaatgactccaaaccttctacttttgaggaatcaagcagaaat
gttgatcttaaaaccctttttgctaagaaggaaggtgaatgggattgtaatgtctgcgct
gtaagaaataactcctcatcgaaagaatgtgttgcttgtagcagccccaatccttgcggt
gacccgaaggctgaaactaaaccagatgatggatttaaaagtgctcctgcaccctcaaca
ggagcctttatgtttggacttggtggaagttctaaggatgccagtgatgccagcttcaag
gcatttggatcccagattcctttttcctttaaatttggaacaccgccaactgttactcca
tcaaatcagcatgagacagagtctggtcaacttgagcaaaatgtggatttgaacaaaaat
gttgatcttaaaaccctttttgctaagaaggaaggtgaatgggattgtaatgtctgcgct
gtaagaaataactcctcatcgaaagaatgtgttgcttgtagcagccccaatccttgcggt
gacccaaaggctgaaactaaaccagatgatggatttaaaagtgcttctgcaccctcaaca
ggagcctttatgtttggacttggtggaagttctaaggatgccggtgatgccagcttcaag
gcatttggatcccagattcctttttcctttaaatttggaacaccgccaactgttactccg
tctaatcagggtgagacaaagtctggtcaacttgagcaaaatgtggattcgaacaaaaat
gttgatcttaaaaccctttttgctaagaaggaaggtgaatgggattgtaatgtctgcgct
gtaagaaataactcctcatcgaaagaatgtgttgcttgtagcagccccaatccttgcggt
gacccgaaggctgaaactaaaccagatgatggatttaaaagtgcttctgcaccctcaaca
ggagcctttatgtttggacttggtggaagttctaaggatgccggtgatgccagcttcaag
gcatttggatcccagattcctttttcctttaaatttggaacaccgccaactgttactccg
tctaatcagggtgagacaaagtctggtcaacttgagcaaaatgtggattcgaacaaaaat
gttgatcttaaaaccctttttgctaagaaggaaggtgaatgggattgtaatgtctgcgct
gtaagaaataactcctcatcgaaagaatgtgttgcttgtagcagccccaatccttgcggt
gacccgaaggctgaaactaaaccagatgatggatttaaaagtgcttctgcaccctcaaca
ggagcctttatgtttggacttggtggaagttctaaggatgccggtgatgccagcttcaag
gcatttggatcccagattcctttttcctttaaatttggaacaccgccaactgttactcca
tccaatcagggtgagacaaagtctggtcaacttgagcaaaatgtggattcgaacaaaaat
gttgatcttaaaaccctttttgctaagaaggaaggtgaatgggattgtaatgtctgcgct
gtaagaaataactcctcatcgaaagaatgtgttgcttgtagcagccccaatccttgcagt
gactcgaaggctgaaactaaaccagctgatggatttaaaagtgctcctgcaccctcaaca
ggagcctttatgtttggacttggtggaagttctaaagatgccggtgatgccagcttcaag
gcatttggatcccagattcctttttcctttaaatttggatcacaggcattcagtcacagt
gatgcaaaaaggaatgagccttctgcaagcacttgtgttgcaaaccaaaccaaaaccgat
gcagctccagaatctaccaaacagtcggcaagcgctgcctgctttattggctctggattt
gataagtttatcaaaaaaagaggtcaatgggattgtgatagctgcctggtcaggaatgag
gcagctgcagtaaactgtgtttcttgtaatgctccttgtagcagcagaaaaaatgaagca
aaatgggattgtaatgtctgtctagttagaaatgaaggcacatctagttgttgtgtgtca
tgcaagagcccttatctaaatgcagacagtactcaggctgcaccagcatccttcaccttt
agctttagtactgatggtcaagctaaccatcctgcaagtacagggtttacagccaacttt
gaagctggtacttttcactttgatcagggtaagaaagacaccccaccaacaactcaagct
gaaacatcttcaactagttcaaaatcctctatttcaatgccagggttaaccagtgaaatc
aaatttggttttaagggctctgaatcaaagccagccaacagtgaacctacctcagtgttg
ctgaacatcgctgaacaacacagagaaaaagaaaaggaagcatcctccacatctgtccag
tcagcggacagtccgagtaatgatgattgtccactgattataggaaagcaggttccattc
agttttgcagacttggccaagtctctgcagggtaactttcagttcgaggaagatgtgtac
aaaacagaagaaaatgatgatatccagtttgagcctgtggttaagatgcctgaaaaagtt
gatcttgttacaggggaagaggacgaggaatgtctgtacacaatacatgttaagcttttc
aagtttgataatgaaactcatcagtggaaagaacaaggggttggaaatctcaaaattctt
aaaaataatcaaaacgggaggcttagagttctaatgagacaagagcaagtgctgaaggtg
tgtgctaatcactggatcactactacaatgaacctaaaacccctttctggctcagatcgt
gcctgggtatggttagcaaacaacttttcagatgacgatcccaagttagaacagttggct
gccaagtttaaaactccacagcttgcagaagagtttaagcaaaagtttgaggagtgccaa
cgactcctcttggacattcctctacagacccctcataagctggctaattcagactga
DBGET
integrated database retrieval system
