Neoarius graeffei (lesser salmon catfish): 132893046
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Entry
132893046 CDS
T10798
Symbol
ufd1l
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132893046 (ufd1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ngra03009
]
132893046 (ufd1l)
Ribosome biogenesis [BR:
ngra03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
132893046 (ufd1l)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
CDC48_2
Motif
Other DBs
NCBI-GeneID:
132893046
NCBI-ProteinID:
XP_060787747
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Position
10:complement(37951823..37973503)
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AA seq
308 aa
AA seq
DB search
MFSFNMFDHPIPRAFHNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLN
ITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMVA
TYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAV
SIIECDMNVDFDAPLGYKEPERPTQHHEEPTDEETDPSNYEMDVGFRAFTGSGNRLDGKK
KGIEPSPFPIVPGDIKRGIPNYDFKVGKITFIRNSRPQPRKTEEDDSSSSFIAFSGEGQS
LRKKGRKP
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgttttctttcaacatgtttgatcacccgatcccgcgggccttccacaaccgcttctcc
actcagtaccgctgttactctgtgtcgatgctggcggggcccaacgaccgatcagacgtc
gaaaaaggcggaaaaattatcatgcccccatctgcactggaccaactcagcagacttaat
atcacataccctatgctatttaaactgaccaataagaactcggacagaatgacacattgt
ggtgttttggagtttgttgctgatgaagggatctgttacctgcctcactggatgatgcag
aacctcttactggaagaaggaggtttggtccaggttgaaagtgtcaatcttatggtggca
acatactctaaatttcagcctcagagtccagacttcttggacatcacaaaccccaaagct
gtactagaaaatgctttgagaaactttgcctgcttgactaccggtgacgtcattgccatc
aactataatgaaaagatttatgagctgcgtgtcatggagaccaaaccagacaaagctgtg
tccattattgaatgtgatatgaatgtcgactttgatgctccacttggttataaagagcca
gagagacctacacaacatcatgaagaaccaacggatgaagagacagaccccagtaattat
gaaatggatgttggattcagagctttcactggctctgggaatcgccttgatggaaagaag
aaaggcattgagccaagtccttttcccatcgttccaggtgacatcaaacggggtattcca
aactatgacttcaaggttgggaagatcactttcatcagaaactccagaccacagcctcgg
aaaacagaggaggatgactcttccagcagcttcattgcattctcaggagaaggccagtcc
ttgcgcaagaagggcaggaaaccatga
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