Neoarius graeffei (lesser salmon catfish): 132893128
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Entry
132893128 CDS
T10798
Symbol
cacna1fb
Name
(RefSeq) calcium channel, voltage-dependent, L type, alpha 1F subunit
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04010
MAPK signaling pathway
ngra04020
Calcium signaling pathway
ngra04260
Cardiac muscle contraction
ngra04261
Adrenergic signaling in cardiomyocytes
ngra04270
Vascular smooth muscle contraction
ngra04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
132893128 (cacna1fb)
04020 Calcium signaling pathway
132893128 (cacna1fb)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
132893128 (cacna1fb)
09153 Circulatory system
04260 Cardiac muscle contraction
132893128 (cacna1fb)
04261 Adrenergic signaling in cardiomyocytes
132893128 (cacna1fb)
04270 Vascular smooth muscle contraction
132893128 (cacna1fb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ngra04040
]
132893128 (cacna1fb)
Ion channels [BR:
ngra04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
132893128 (cacna1fb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
GPHH
Ca_chan_IQ
PKD_channel
HemY_N
Motif
Other DBs
NCBI-GeneID:
132893128
NCBI-ProteinID:
XP_060787927
LinkDB
All DBs
Position
10:58284012..58442861
Genome browser
AA seq
2038 aa
AA seq
DB search
MNEENRKSNGYSKKMEESGGEGEEEEEGGGEEYERGQDEEDDWEDGGKPRINRTDTLNSN
TSSTGTQRKKSQHGKKQVQGSNQVQRAPRALFCLKLNNPIRRAALSIVEWKPFDIFILLA
IFANCVALGVSKPFPEDDSNATNHDLEQVEYIFLIIFTIETFLKILAYGLVMHPSSYIRN
GWNLLDFVIVIVGLFSVVLETMTHKSGETHHMPGKPGGLDVKALRAFRVLRPLRLVSGVP
SLQIVLNSIMKAMVPLLHISLLVLFVIIIYAIIGLELFIGRMHKTCYITGTDEFADDDPV
PCAFTGHGRQCTVNGSECRGRWEGPNGGITNFDNFFFAMLTVFQCITMEGWTDVLYWMND
AIGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDL
CGYMDWIMQAEDIDEFNEDGNRRMTLRDLADKKRGKFSWFTHSNETHASLPASETASENT
ENIDEEHTDCCATCCAWIMKNPCCRTLRRWNRGIRRTCRKAVKSVTFYWLVLILVFLNTA
LSASEHYNQPDWLTDVQEIANKVLLSLFTVEMLLKMYSLGLQAYFVAFFNRFDCFVVCGG
ILETVLVEMEIMPPLGISVLRCVRLLRIFKVTRHWTALSNLVASLLNSMKSIASLLLLLF
LFLIIFALLGMQLFGGKFNFDETHTKRSTFDAFPQALLTCFQILTGEDWNMVMYDGIMAY
GGPVFPGMIVCLYFVILFICGNYILLNVFLAIAVDNLAGADGDDKKNEKKNQGEEAEEEG
ENTEAKIDMDEYEEEEEQDEGDDEEGETQLNVADFAPPKEKVVPIPEGSAFFCLSKTNPI
RVGCHIVINHHIFTNLILVFIILSSISLAAEDPIRAHSFRNNVLGYADYAFTSIFTIEIL
LKMTVYGAFLHQGSFCRNWFNLLDLLVVSVSLVSFFLHSSAISVVKILRVLRVLRPLRAI
NRAKGLKHVVQCVFVAIRTIGNIMIVTALLQFMFACIGVQLFKGKFYRCTDEAKHTPEQC
KGTFVIYKDGDVNHPLVRQRIWHNSDFNFDNVLMGMMALFTVSTFEGWPALLYKAIDANS
ENHGPIYNYRVETSIFFIVYIIIIAFFMMNIFVGFVIITFREQGEAEFKNCELDKNQRQC
VEYALKAQPLKLYIPKNPVQYRFWSMINSTGFEYIMFVLILLNTVTLAVQHYEQSKLFSY
VMDILNMVFTGLFTVEMIVKLLALRLKHYFTDAWNSFDALIVVGSVVDIVVTEFSSSEDS
SRVSITFFRLFRVMRLVKLLSKGEGIRTLLWTFVKSLQALPYVALLIAMIFFIYAVIGMQ
TFGKIAMQAHTPINRNNNFQTFPQAVLLLFRCATGEAWQEIMLASLPGKRCDADSDFEPG
EEFTCGSNFAIVYFISFFMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWS
EYDPEAKGRIKHLDVVALLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVTFNATL
FALVRTALKIKTEGYPDQENVELRIIIKKIWKRMKPKILDEVIPPPAEEEVTVGKFYATF
LIQDYFRKFRKRKEKVGMADPDPQKPSALQAGLRTLQDLGPEIRLAMNADLEEEDLEEEQ
EEDEIENGYVGNAESLDRRSSVVSTPTGSSVAVSGEGFSNGGLSHRNSLTRTPNGSGILE
QEKFRRGETRRSSLYFQHKNGVIDQPAKRVSYYKHPRRDSRDHFSSSLSRSIDGEEGYPR
EQLIYRREEDDEVMAPRDRHGYPDEVPMHSGHRAYGYDGQPAYTNQDGSSYGEARRSARR
RLLPATPTGRKSSFTIQCLRRQGSSDDLPIPGTYHQNFPPCRARSQAYGSYDSRRSSSRS
STGSTASWANPSPRRSRLLYAPLILVEDERSAGTSSVGLWNKKAEDGASVPVAGRVGQPF
RAYTTLRVPTQLSPHYSEKRGSADSLVEAVLISEGLGLYAKDPKFVAFAKREIADACHMT
IDEMESAASDLLSRGSTGSSGGGFINHSDLGGLYSDEELVRSHDEDELADEMTCVTSF
NT seq
6117 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaggagaaccggaaaagtaatggatactccaaaaagatggaggaaagtggcgga
gaaggggaggaggaggaagagggtggaggagaggagtatgagagaggacaggatgaggag
gacgattgggaagacggtgggaagccaaggataaatcgcacagacacactcaactccaac
accagctctacagggacacagaggaagaagagccagcatggcaagaagcaggtgcagggc
tccaaccaggtgcagcgagcaccaagagccctcttctgccttaagctgaataaccccatc
cgcagggctgcactgtcaatagttgagtggaaaccttttgatatctttattctcctagca
atttttgctaactgtgtggctctgggagtatccaaaccttttcctgaggatgactccaat
gctactaaccatgacttggaacaagtggagtacatctttctgatcatcttcaccatagaa
accttcctaaagattctggcctatggtctggttatgcacccgagctcctacatccgcaac
ggctggaacctgttagactttgtcatcgtaattgttgggttgttcagtgtggtgttggag
accatgacccataaatccggggaaacacaccacatgccagggaagccaggaggcttggat
gtgaaagcactcagagctttcagagtgttacgacctctcagacttgtctcaggagtgccc
agtttgcagattgtgttgaactccattatgaaagccatggttcctttactgcacatatct
cttcttgtcctatttgtcataatcatctatgcaataattgggctggagctcttcatcggc
cgtatgcacaagacatgctacattactggcacagatgagtttgcagatgatgacccggta
ccatgtgcattcactggtcatggacgtcagtgtactgtgaatggctcagagtgtagggga
aggtgggaggggccaaacggcggcatcacaaactttgataatttcttctttgccatgcta
actgttttccagtgcattacgatggagggctggactgatgtcctttactggatgaatgat
gccatcggttttgagctgccctgggtctactttgtaagcctggtcatctttggatccttt
tttgtcctcaaccttgtgttgggtgtgttgagcggtgaattctctaaggagcgagaaaag
gctaaagcacgtggggattttcagaagctgcgggagaagcagcagctggaggaggacctg
tgtggctatatggactggatcatgcaggctgaggacattgatgagtttaatgaggatgga
aacagacgtatgaccctacgtgacctggctgacaaaaaacgaggaaagttcagctggttc
acccactccaacgagactcacgcaagccttccagctagtgaaacagcctcagaaaacaca
gaaaatatagatgaagaacacactgactgttgtgctacttgctgcgcttggataatgaaa
aacccctgctgtcgcacattgcgccggtggaaccgtggcattcggagaacctgccgaaag
gccgtgaaatctgtgacattctattggctggtgttgattctggtgtttctcaacacagca
ctaagtgcatcagagcactataaccaaccagactggctcactgacgtgcaggaaattgcc
aacaaggtgctactgtctcttttcacggttgagatgttgctgaagatgtacagtttggga
ttgcaggcctactttgtagccttcttcaatcgttttgactgttttgtggtgtgtggagga
attctggagactgtgctggtggagatggagatcatgccacctctcggcatttctgtgctg
cgctgtgttcggttgcttaggatcttcaaagttacacgccactggacagctctgtccaat
ttggtggcatctctactcaactctatgaagtccattgcatctctgttgctgctgcttttc
ctcttcctcattatctttgctctgctggggatgcagctctttggtggcaagttcaacttt
gatgagacacatacgaaaagaagcacctttgatgcttttccgcaggcccttctcacctgt
tttcagatcctgacaggtgaggactggaacatggtgatgtatgatggaattatggcgtat
ggaggccccgtgtttcctggtatgattgtgtgtctgtattttgtcattctcttcatctgt
ggtaactatatcctactgaatgtcttcttggctatcgctgtggacaatttagcaggggca
gatggggatgacaaaaagaatgaaaaaaagaaccagggagaggaggctgaggaagaagga
gagaatacagaggcgaagattgacatggatgagtatgaggaagaggaggagcaagatgaa
ggagatgatgaagaaggagagactcagctgaatgtggctgattttgctcctccgaaagaa
aaagtggtgccaattccagaaggcagtgctttcttctgcctcagcaagaccaacccaata
agagtaggatgtcatatagtgatcaatcatcacatcttcactaacctgatcctggtattc
atcatcctcagtagtatttctctggctgctgaggaccctatcagagcacactcctttaga
aataatgtcttgggctatgctgattatgccttcacctccatattcacaatagaaattctt
ctcaagatgacggtctatggggcgtttttgcatcaaggctctttctgtaggaactggttt
aatctcttggatctcctggttgtcagtgtgtctctggtttccttcttcctacattcaagt
gcgatctctgtggtgaaaatcctgagagtgctacgagtgctcaggcctctccgtgccatc
aacagagccaaaggtctaaagcatgtggtccagtgtgtgttcgtggctatacggaccatt
gggaatattatgattgttactgctctgcttcagttcatgtttgcatgcatcggtgttcaa
ctctttaagggtaaattttatcgctgcacagatgaggcgaaacacacacctgagcagtgc
aaaggcacgttcgtgatctataaagatggcgacgtgaatcaccctttagtacggcagcgc
atctggcacaacagcgattttaactttgacaatgtgctgatgggcatgatggctctgttc
actgtgtccaccttcgagggctggcctgcgctcctctacaaggctatcgatgccaactcg
gagaaccacggccccatctacaactatcgtgtggagacctcaatcttttttattgtctac
ataatcatcatcgccttcttcatgatgaacatctttgtaggttttgtcatcatcacgttc
cgtgaacagggagaggctgagtttaagaactgtgaactggacaagaaccagagacagtgt
gtagaatatgctctgaaagcccagccactgaagctgtacatcccaaagaacccagtgcag
tatagattctggtcgatgatcaactccacagggtttgagtacatcatgtttgtgttgatt
ctcctcaacaccgtcactttggctgttcagcattatgagcagtccaaactcttcagctat
gtcatggacatcctcaacatggtctttacaggcctcttcactgtggagatgattgtcaag
ttgttagcccttcgactcaagcactattttactgatgcttggaactcctttgatgcgctg
attgtggtcgggagtgtggtggacattgtggtgacagagtttagtagttcagaagacagt
tctcgggtgtcaatcacgttcttccgtctgttccgtgtaatgcgattggttaagctgctt
agcaaaggggagggcattcgcacactgctctggacctttgttaaatcgctccaggccttg
ccttatgtagcgctactcattgccatgatcttctttatctatgctgtgattggtatgcag
acttttgggaagattgcaatgcaggctcacacgccaatcaaccgtaataacaacttccag
acgtttccccaggcagtgttgttgctcttcaggtgtgctacaggtgaggcatggcaggaa
attatgttggccagtcttccagggaagcgctgtgatgcagattcagactttgaacctgga
gaggaattcacttgtggcagcaattttgccatcgtttacttcattagcttcttcatgctg
tgtgctttcttgattattaatttgtttgttgctgtcatcatggacaattttgactatttg
acacgtgattggtctattctggggccacatcatcttgatgagttcaaaaggatttggtca
gagtatgatccagaagccaagggtcgcataaaacacttagatgtggtagctctgcttagg
aggatacagcctcctctgggatttggaaaactttgtccccaccgtgtggcctgcaagaga
ttggttgctatgaacatgcccctgaactcagatggcacggtgaccttcaatgccactctg
tttgcccttgtcagaactgccttgaagattaaaactgagggttacccagaccaggagaat
gtggagctgaggatcatcattaagaagatctggaagcgcatgaaacccaaaattctggat
gaggttattcctcctcctgctgaggaggaggtgactgtgggtaagttttatgccacattc
ttaattcaggactacttcaggaagttccgtaagagaaaagagaaagtgggtatggcagac
ccggacccccaaaagccatcagctctacaggcgggtctgcgcaccctgcaggaccttggg
ccagagattcgtctggccatgaatgcagacctcgaagaggaggacctggaggaagaacaa
gaagaggatgagattgaaaatggctatgttggaaatgctgagtccttagaccgccgctcc
tccgtggtctcaacaccgacaggttcatccgttgctgtgtcaggagaaggtttctccaat
ggaggcctgagtcacaggaattcactaaccagaacaccaaatggcagcggtatcttagag
caggagaaatttagaagaggagaaaccagacgctcctccctctatttccagcataagaat
ggtgtgatcgaccagccagcaaagagagtttcatattacaaacatccacggagagactcg
agggaccacttcagctcttctctgtcacgaagtattgatggagaggaggggtaccctagg
gagcagcttatctacagaagggaagaagatgatgaggtcatggcacccagagacaggcat
ggctacccggatgaagtccccatgcattctggccatagagcttatgggtatgatggacag
cctgcatacactaaccaggatggcagcagttatggcgaggccagaaggtcagccagaaga
cgactcctgcctgcaacccccactggccggaagtcatcttttactatccagtgtctgaga
agacaggggagtagtgatgatctccccatcccaggcacctaccaccagaatttcccacca
tgtagagcacgctcacaggcgtatggcagttatgactcacgccgcagcagcagccgttct
tccacaggctccacagcctcctgggcaaaccccagcccccgccgcagtcgtcttctttat
gcccccctcatactagtggaggatgagaggtcagctggcacaagcagtgtgggcctctgg
aataaaaaggctgaggatggtgccagtgtgcctgtggcagggcgagtgggtcagccgttc
agggcctacaccaccctgagagtgcccacacagcttagcccgcactacagcgagaagaga
ggcagtgctgacagcctggtggaggcggtactaatctctgagggccttggcctatacgct
aaggaccccaagtttgtcgcctttgccaagcgggagattgcagatgcctgtcatatgacc
atagatgaaatggagagtgcggccagtgacctgctgagtcggggcagcacagggagctct
ggaggtggcttcatcaatcactcagacttgggagggctttacagtgacgaggaacttgtc
aggagccacgatgaggatgagcttgctgatgaaatgacatgcgttacctccttctga
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integrated database retrieval system
