Neoarius graeffei (lesser salmon catfish): 132895989
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Entry
132895989 CDS
T10798
Name
(RefSeq) calcium-responsive transactivator-like
KO
K15623
protein SSXT
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132895989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ngra03036
]
132895989
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
132895989
GBAF(ncBAF) complex
132895989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
132895989
NCBI-ProteinID:
XP_060792698
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All DBs
Position
13:8097443..8177534
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AA seq
387 aa
AA seq
DB search
MSVTFSSTRPRGKGEVTQQTIQKMLDENHYLIQCIMDYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPNPGMSLGGGGMGGSSAGGSLHSQSNLNDTMAPSSLMQSQMS
NGPSHTPMQQQQQQSGPSTSSMSSGPSFAHSVPSSSSSQGTALYPPSRTNLNIQSNPVSM
MHQQGSGPHYSSSGGQHYQGQQTMGMMGQSNQGNSMVSQRPIGNYRPAQQGKSGSQYMGQ
EEFYGEQYGHTPSSSEPVNQQYYPDGHNEYSYQQSSYGEQSYERSFEDSSQHYYESGNPQ
YSQQQSQYQQSSGQQQTFNQQQYQSQTGYSSQGQGYSPAQGAPSQYSQYQQGQNQQYSSF
RSTQSTPGSQTQRSYTYEQGQYGNYQQ
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtcacattttcatcaacacggccgagagggaaaggtgaagtgacccaacagacc
atacagaagatgctggacgaaaatcactatctgattcagtgcattatggactatcaaagc
aaaggaaagactgcagagtgcacacagtatcagcagattttacacagaaacctggtttat
ttggccacaattgcagactccaaccaaaacatgcagtccctcttaccagcgcctccaaac
cccgggatgagtttgggtggaggtgggatgggtgggagcagtgcaggaggatctctccac
tctcagagtaaccttaatgacaccatggctccttcctcactaatgcagagtcagatgagt
aatggcccaagtcacacccccatgcagcagcagcagcagcagtccggcccttccacctcg
tccatgagctccgggccgagcttcgctcactcagtgccctcatcctcatcgtcacagggc
acggcactgtacccaccctcccgcaccaacctcaacatacagtccaacccagtctcgatg
atgcatcagcaaggttcaggaccccattactcctcttctggaggtcagcactatcagggg
caacagaccatgggcatgatggggcaaagtaatcaaggcaacagtatggtctcacaaagg
cctatcggaaactatcgtcctgctcagcaaggtaagtctggatcacagtacatgggtcag
gaggagttctacggagagcagtacggacacactccaagctccagcgagcctgtaaaccag
cagtattaccctgatggtcacaatgagtactcgtatcagcagtcgtcttatggagagcag
agttacgagaggtcatttgaagactcatcgcaacactattatgaaagtggaaaccctcag
tatagccaacagcagtcacaatatcagcagagctcaggtcagcagcagacattcaaccaa
cagcagtaccaatcacagacaggatacagcagccaaggacagggttacagtccagcacag
ggagctccatctcagtactctcagtatcaacagggtcagaatcagcagtattcctcattt
cgatccacacaatctactcctggctctcaaacacagagatcttacacgtacgaacagggt
cagtatggaaactaccagcagtaa
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