Neoarius graeffei (lesser salmon catfish): 132898446
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Entry
132898446 CDS
T10798
Name
(RefSeq) antigen peptide transporter 2-like
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra02010
ABC transporters
ngra04145
Phagosome
ngra05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
132898446
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
132898446
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132898446
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ngra02000
]
132898446
Enzymes [BR:
ngra01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
132898446
Transporters [BR:
ngra02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
132898446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_22
AAA_30
AAA_16
RsgA_GTPase
AAA_15
Motif
Other DBs
NCBI-GeneID:
132898446
NCBI-ProteinID:
XP_060796035
LinkDB
All DBs
Position
14:54644380..54658700
Genome browser
AA seq
716 aa
AA seq
DB search
MADLAAGSACRAYGALLFQDLILWLALWTALLCSEGALHMNLTWLWAFRAFSWFLLYTVS
LATLDKTTHNLLKPWVALQCFVAPVFDMVQTLVLGGRCGFSPVPVPSMVVLNALTGILIH
LMWDKAFPSKKVKKEQEAKVLLMRVIHCSKPDYLHLGAAFFFLILAALFESRIPYYVGKI
IDGLSGEYKHDNFLWAIACMAFYSFGSSMFSGLRGGMFMCSLSRLNNRIRHMLFQNLMKQ
EISFFEENKPGSLTSRLASDTDKMGRSIALNVNVLLRSLVKTCGMLVQMLSLSWQLTLLT
CVEMPLLAVLQNYYNIYYQKRSSELRDCLAEVEQLASSAIRSVKTVRSFRAETQELKRYQ
EALDRKLQILQCKGISSAVHHLLRKCLSLSLRVAMVLLGRRLISSGQLSSGSLLAFMLYQ
KDMVTNMKNLVKVYGEILNTAWSTEKVFQLLDRKPNMQEAGEWIPEKLEGRITFDNVTLS
YPSQPEKKALKSVSIELSPGKMTALVGPSGGGKTSCVSLLQRFYEPQQGQVLLDTAPLDQ
YQHQYLCSQMAAVSQNPVLFSGSVKYNIAYGLRDCTIERIKEAAKKANAHDFICRLDDGY
DTDIGECGGQLSSGQKQCIAIARVLIRNPKIIILDEATSNLDFNTQHAIQKVFSGIKDQT
VLVIAHRLQTIERADHIIYLEDGMVKEQGTHAQLMAIKGGYFKLREKLFPVDSDQD
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggctgacctggctgcaggctctgcatgccgtgcatatggagctctccttttccaggac
ctgatcctctggctcgccctgtggactgcacttctgtgctctgaaggtgctttgcacatg
aacctgacatggctgtgggctttcagggctttcagctggtttctgctttacacagtcagt
ttagccaccctggataagaccacacacaatcttctgaagccctgggtagcattacagtgt
tttgtagctcctgtgtttgacatggtgcaaacactagttcttggagggaggtgtggcttt
agtcctgtgcctgtcccctccatggtggttttaaatgcactgactggcattctgatccat
ctgatgtgggacaaggcattccctagtaaaaaggtgaagaaagaacaagaggccaaggtt
ctcctgatgagagtgattcactgttcaaaaccagactaccttcacctgggggcagccttt
ttcttcctcatcttggctgcattatttgagtcacgtattccgtactacgtggggaaaatc
attgatggtttgagtggagaatacaagcatgacaacttcttgtgggccattgcatgcatg
gcgttttactcttttggaagttctatgttctctggcttgagaggaggcatgttcatgtgt
agcctgagcagactcaacaatagaattcgacacatgctgtttcagaacctgatgaaacag
gaaataagcttctttgaagaaaataaaccaggaagcttgacatcgcgactggcctccgac
actgataaaatgggccgctctatagccctgaatgtaaatgtgctcctgagaagtctggtt
aagacatgtggcatgcttgtgcagatgctcagcctgtcctggcagctcacactcctcacc
tgtgtggagatgcctctcctcgctgtgctacagaactattacaacatttactaccagaaa
agatcaagtgagctgcgggactgcctggctgaagtcgagcagctggcctcttctgccatc
aggtctgtaaagacggtgcggagcttcagggctgagactcaggagctgaagcggtaccaa
gaggctctggacaggaagcttcagatactgcagtgcaagggcatttccagtgcagtccac
caccttctgcgcaaatgtctgtcattgagcctgagggtggctatggtgcttcttggacgc
cgtctcatctcctctggtcagctaagcagtgggagccttctggcttttatgctgtatcaa
aaagacatggtgaccaacatgaagaacctggtgaaggtctatggagaaatcctgaacaca
gcatggtcaacagagaaggtgtttcagctgctagacagaaaaccaaacatgcaagaagca
ggcgaatggatacctgagaaactggaaggaagaattacttttgataacgtcaccctctct
tacccttcccaacctgaaaagaaagcacttaagtctgtgagtatagagctgagtccaggg
aagatgactgcactggttggcccctctggtggaggtaaaacttcctgtgtcagtctgctg
cagaggttttatgagcctcaacagggccaagtgctactggacactgcaccacttgatcag
taccaacaccagtacctgtgtagccagatggcagctgtgtcccagaacccagtgctgttc
tctggctctgtgaaatacaacattgcatacggcctacgtgactgcaccatagagaggata
aaagaggcagcaaagaaagccaatgcacatgactttatttgcagactggatgacggctat
gacactgacattggagagtgtggtgggcagctatcctcaggacagaagcagtgtattgct
atagccagagtgttgatcagaaatccaaaaataatcattttggatgaagcgaccagcaac
ttggacttcaacactcagcatgcgattcagaaagtcttctctggaataaaggatcagaca
gtgctggtgatcgctcatcgtctgcagactatcgagagagctgatcatatcatctatttg
gaagacgggatggtcaaggagcaaggaacacacgcgcagcttatggctataaaaggggga
tatttcaagcttagggaaaaattgtttccagtggattcggaccaagactaa
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