Nguyenibacter sp. L1: QN315_06405
Help
Entry
QN315_06405 CDS
T09784
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ngu
Nguyenibacter sp. L1
Pathway
ngu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ngu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QN315_06405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngu03019
]
QN315_06405
03009 Ribosome biogenesis [BR:
ngu03009
]
QN315_06405
Enzymes [BR:
ngu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QN315_06405
Messenger RNA biogenesis [BR:
ngu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QN315_06405
Ribosome biogenesis [BR:
ngu03009
]
Prokaryotic type
rRNA helicases
QN315_06405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Motif
Other DBs
NCBI-ProteinID:
WRH89234
LinkDB
All DBs
Position
1413622..1415415
Genome browser
AA seq
597 aa
AA seq
DB search
MPFPETHPALQRALDARGYAEPTPVQKAVLDVAADGRDLLVSAQTGSGKTVAFGLAMADT
LLGGAERFGPAGAPLAVIIAPTRELAMQVQRELAWLYGPAGARIVSCIGGMDARREARAL
EIGAHIVVGTPGRLCDHQSRGRLVLSDLRVVVLDEADEMLDLGFREELEQLLDAMPDTRR
TLLFSATIAKEIAALARRYQRDALRIDTLSGARQHADITYRAVLTDAREIIPAVVNILRF
TDSKTAMVFCATRELVRHMQGALLERGFSSVALSGELGQNERTRAIESLRTGQARVCVAT
DVAARGIDIPALGLVIHASLPTDSATLLHRSGRTGRAGRKGVCALVVPVSMRRRAERLLA
TAKLSAEWIAVPTADAIRAQDAERLLNDPILTESTAPGDEDLVARLVEGRSAEQLASALL
QAYRAHLPDPEDIRPLRVEAPRAPREGDYARRTERPAREEHAMQGAGAWFSMSVGRQDKA
DPKWLVPLICRLGGVRKTDIGAIRIADDHTLFEISASSAERFGACVAATDSDEVRITPAG
APAGGPRGRAAPGERGRGAPRKPGGKGGFSQGPGGARTGRAPARTSPSSRKRAPARG
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgccgtttcccgaaacccatcccgctcttcagcgcgcgctcgatgcgcgcggctatgcc
gagccgaccccggtccagaaggccgtcctggacgtcgcggcggacgggcgggacctgctg
gtgtcggcgcagaccggatcgggcaagaccgttgccttcggcctggcgatggccgacacg
ctgctgggcggcgccgagcgtttcggccccgccggggcgccgctggcggtgatcatcgcg
ccgacccgcgagctggccatgcaggtgcagcgcgaactggcctggctgtacggcccggcc
ggcgcgcgcatcgtgtcatgcatcggcggcatggatgcgcggcgcgaggcccgggcgctg
gagatcggcgcccatatcgtggtgggcacgccggggcggctgtgcgaccaccagtcgcgc
ggccggctggtcctgtccgacctgcgcgtcgtcgtgctggacgaagccgacgagatgctg
gacctgggctttcgcgaggagctggaacagttgctggacgcgatgcccgatacgcggcgc
acgctgctgttctcggccaccatcgccaaggagatcgcggccctggcgcgccgctatcag
cgcgatgcgctgcgcatcgacacgctgtcgggggcgcggcagcatgccgacatcacctat
cgcgccgtgctgaccgatgcgcgcgagatcatcccggcggtggtcaacatcctgcgcttt
accgacagcaagaccgcgatggtgttctgcgccacgcgcgaactggtccgccacatgcag
ggcgcgctgctggagcggggcttttcctcggtcgcgctgtcgggcgagctggggcagaac
gagcgcacgcgcgcgatcgagagcctgcgcaccgggcaggcccgcgtgtgcgtggccacc
gacgtggcggcccgcggcatcgacattccggccctggggctggtgatccatgccagcctg
ccgaccgacagcgccacgctgctgcatcgctcgggccggaccggccgcgccgggcgcaag
ggcgtgtgcgccctggtggtgccggtgtcgatgcgccgccgcgccgagcggctgctggcc
acggcgaagctgagcgccgaatggattgcggtgccgaccgccgacgcgatccgcgcccag
gatgccgaacggctgctgaacgacccgatcctgaccgagagcaccgccccgggcgacgag
gacctggtcgcccgcctggtcgagggacgcagcgccgaacaactggccagcgcgctgctg
caggcctatcgcgcccacctgcccgaccccgaggatatccgcccgctgcgcgtcgaggcc
ccgcgcgcgccgcgcgagggcgattacgcccggcgcacggagcgcccggcgcgcgaggag
cacgccatgcagggtgccggggcctggttttcgatgagcgtcggccgccaggacaaggcc
gatccgaaatggctggtgccgctgatctgccgcctgggcggggtgcgcaagaccgatatc
ggcgcgatccgcatcgccgacgaccatacgctgttcgaaatctcggcgtcttcggccgag
cggttcggcgcctgcgtggccgccaccgattcggacgaggtgcggatcaccccggccggc
gcccccgccggtggcccgcgcggccgggcggcgccgggcgagcgcggtcgtggcgcgccg
cgcaagccgggcggcaagggcggcttctcccagggcccggggggcgcccggaccggccgg
gccccggcccgcaccagcccgtcgtcgcgcaagcgcgcgcccgcgcggggctag
DBGET
integrated database retrieval system
