Fusarium vanettenii: NECHADRAFT_58915
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Entry
NECHADRAFT_58915 CDS
T01612
Name
(RefSeq) hypothetical protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
nhe
Fusarium vanettenii
Pathway
nhe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nhe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NECHADRAFT_58915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nhe03019
]
NECHADRAFT_58915
Messenger RNA biogenesis [BR:
nhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
NECHADRAFT_58915
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
NECHADRAFT_58915
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
CNOT1_TTP_bind
CNOT1_HEAT
Motif
Other DBs
NCBI-GeneID:
9663781
NCBI-ProteinID:
XP_003052523
JGI:
58915
UniProt:
C7YLN8
LinkDB
All DBs
Position
3
AA seq
2186 aa
AA seq
DB search
MVPPPRAGSFSPNPAQTLQTGSSHSPHPSQAAILSAGASPSASSPTGTNSLTKIVVAQVY
LLLSTIKEDKDRAKWELQVDQLKKLIDEHGMEVFSKYFTRLVAGNAPQIFPGLNRPVSNP
GNYHILVGEMRKIAHDPEQASKIAESIESGTEDIFRDFDLSTFMEHFKLDALEKTLLALA
FKLGSRTDLKTKADAILSTNFPTFVDIISRPELEAHADLTPSFIALIIDRFLQYHPPSFN
PSSRRDLESYLAKRYISVDQPPPSEVLAALDLSRVLADRPSNGLVRYLQKTGIEFTRDEE
TCVSYLQNRASNLQLNPEQVSAALTFTTITQTPQHDPEVLVAALRRVLPKSFDWMEVIGY
FDQPSARVSSQQFLRLYNAFLPIAQDPNSDLDIQRLWGGVWRHPEAQLSFVSAYASLTPE
QLDATTIPGLRRSITLDDYVNSPPNVRERAAVAVKHPLVSVAALSSIFNVALSSVVASTS
VEAKRLFQEVVVPNLDIFLVSAFEVPRQHWAAMAVDTLNSLFENFLYKRSPEYDFVLDSL
WKKDKEWVTQRLIDAHAIKPVDLPLVFEHAVKHNWLDSLVYLANGFGIDLAALAHAEGYL
DLSKWARFYADRGNEMSRTLLQFLMIKANLESQYQRGGPDGQPLAKTTTTLQVRTVSALL
HILEDLLPKGPVQELIIIQRHCIIAYPRLINYGEGYDDIIDANGKDGNALPPTANSKMEE
HYKKMYSDEMQVRNIVEVLDRYKHSKDALDQDVFACMIHGLFDEYSHYVDYPLEALATTA
VLFGGIISHKLISGLPLQIGLGMILEAVRDHVPEDPMYKFGLQALMQLLVRFREWPLFCR
QLVLIPGLMGTEAHKKAEEVVMEHEEDLSRGPNGAGTPHGVGYPGDTFPNGNSEEQANAD
RQAPAFSSINVDPPAPEMDFEDPNEVEQDKVQFVLNNITEGTLVSMSSELRETLERRHQQ
WFACQLVEERAKMQPNYHHVYLELVRLLEDSSLWSEVLRETYVSVSRMLNSEATMQNSTE
RTHLKNLGGWLGLMTLARDRPIKHRNIAFKQLLIEAHDTKRLIVVIPFVCKVLVQGATSA
VFRPPNPWLMDIIHLLIELYHHAELKLNLKFEIEVLCKGLNLDHKSIEPSGEILNRPVIE
EPADVLPQEQIDAFENLSLNGMGSAVGAGLTPQAIAPTIPDLGPLINIPPTNEMVVTSTR
LHDIVRTALSRALQDIIQPVVDRSVTIAAISTQQMIHKDFATEPDENRVRTSAINMVKAT
AGSLALVTSKEPLRANFTNYMRNLSNDIPQGLPEGTIIMCVNSNLDLACNIIEKQAEERA
VPEIEEMMEGELEARRRHRMQRPNEPYFDSSLSRWAMTIPHPYKLSPTSNGLNSDQMAIY
EDFARQPRSAAAPAPSHGPSTSDATRSLANEVLQEQFTAMPNIPTPAETPAIQQHLSTQM
QQPYAPVHAGANAMSNGRSPGFTMDVRGLAERVNKLLQELLRVATEAREDHFQGLPRPHP
VLDVVDALVQHIIKTSQNSEEFAIYAAEQISQIIFSPVEDNLTLESLVHVLETLRKISGP
ALNNRVRALFSQQPGPTFLSLPLLAALTRTDLLDWRNIDHAMSKALQARKEGSLDFLEHM
LDLTLLNNRPIALYADFVRTLEAAWAWIREDPGSAIGQRVRSKLIGSGLSHPSQTDDQVL
YRQDQMDYVLDEWVRLCNNHNASDASGSIFVQQLQAKQVIRDRDDFFVFLRTAIDTSVER
FEHTMHPGALTDVYITVDALAKLIGTFVSLQFDTSSTRASFVDSTMALITLVLNHHSVKR
GEQLNQRVFFRLLSMLLHEIHAISEDISEEERRDILLRIASRLAGMGPALIPGFTYGWLS
LVQHRAFMPVLLQLPDGAGWGLFVDLVCQLFESLGDQLKVFEVSNIAKDIYRAAFKLLII
LQHDFPDFVAANHVRICASIPPHCTQLINAVLAANPQQSPKFVEMNAKNRSDESRVHPGL
VNEATVILRDAGLLGVVDQALQSGPSEDIVANITHSMTHNAPKVTTYGHVPVAINLAVIN
AVVIYIGQHAADQAAQAGTAVTVSGDEYEVSTLSLIIHELPAEARYYLLVSVVNQLRFPN
AHTDFFSQALLYIFSKDLEDPEETEIRQGITRVLLERLVSFWPQPWGLLFTVVEIVKCDK
YNFFELPFIKAIPEVADKFGQVVQRG
NT seq
6561 nt
NT seq
+upstream
nt +downstream
nt
atggtcccaccacctcgagcgggatcattttcgcccaatcctgcgcagactcttcagacg
ggttcgagccattctccccacccatcgcaggccgccatcctcagtgctggcgcaagccca
agcgccagcagtccgacgggcaccaactccctgaccaagattgtcgtggcccaggtctat
cttctgcttagcaccatcaaggaggataaggaccgcgccaagtgggaattgcaggttgac
caattgaagaagctcatcgatgaacacggtatggaagtcttctcaaagtacttcacccgg
cttgtcgccggcaatgcgccgcagatattcccaggcctcaacaggcctgtctcgaatcca
ggcaactatcacatcctcgtcggcgagatgcggaagattgcgcacgacccagagcaagcg
agcaagatcgccgagtcaattgagagcggcactgaagacatcttccgcgactttgacctc
tcgacctttatggagcatttcaagctcgatgccctggaaaagaccctgttagctctggcc
ttcaagcttggctcccggaccgacttgaagaccaaagccgacgctatactctcgacaaac
ttcccaacctttgtcgatatcatctctcgacccgaactcgaagcccatgctgaccttacc
ccctccttcatcgccttaatcatcgaccgattccttcagtatcaccctcccagctttaat
ccttcttctcgtcgagatctcgagagctacctcgcaaagcgatatattagcgtggatcag
ccgccgccttccgaggttctagctgctcttgacctgagcagagtgctcgccgatcgacca
tccaatggcttggttcggtacctccaaaaaaccggcatcgaattcacgcgagacgaggaa
acttgtgtctcctatctacagaaccgtgccagcaacctacagcttaaccccgaacaagtc
tctgccgccctgacgttcacaactatcacccaaaccccgcaacatgaccccgaagtcctg
gtggcggctctcaggagggtattgccgaaatcctttgactggatggaggtgattggttat
ttcgatcagccgtccgctagggtctcttctcagcagttcctgcgtctctacaacgccttt
ttgccaatagcgcaagacccaaactccgatctggacatccagcggctttggggtggcgtg
tggaggcatccagaggcgcagctatcctttgttagtgcatacgcctctctaacccccgaa
cagcttgacgcgacgacgatccctgggcttcgacgcagtattactctagacgactatgta
aactcccctcccaatgttcgcgagcgagctgctgtggctgtcaagcatccgctcgtttct
gttgccgctctctcctcaatcttcaacgtcgcactcagttccgttgtggcgtccacgagc
gtcgaagcgaagaggctgtttcaagaagttgttgtgccgaatctcgacatctttctcgtt
tccgctttcgaggtccctcgccagcattgggcagcaatggccgttgatacgctgaactcc
ttgttcgagaactttctctacaagcgctcacctgagtacgactttgttctcgatagcctg
tggaagaaggacaaggagtgggtaacgcagcgcttgattgatgcgcacgccatcaagcct
gttgatcttccccttgtttttgagcatgcagtcaagcacaactggttggattcgctcgtg
tacctggccaacgggttcggtatcgacttggctgcgctggctcacgctgagggatatctg
gacctgtccaagtgggcacggttctatgcagacaggggcaacgagatgtctcgcactctc
ctgcaattcctaatgatcaaggccaatctagaaagccaataccaacgaggcggccctgat
gggcaaccgcttgcaaagactacgacaactttgcaggttcgaaccgtatccgcgctatta
cacatcctcgaagatctcttgcccaagggtcctgtccaggagctcatcataattcagcgg
cactgcattatagcgtacccgcgactgatcaattatggcgaaggctacgacgacatcatc
gacgccaacggcaaggatggaaatgcccttcccccgaccgctaatagtaagatggaggag
cactacaaaaagatgtacagcgatgaaatgcaggttcgaaacatcgtcgaggttcttgat
cggtacaagcattccaaggatgccctagatcaagatgtctttgcatgcatgattcatgga
cttttcgacgagtacagccactacgtcgattatccactggaagcccttgccacaacagcc
gtgttgtttggcggcatcatctcgcacaagctcatttcagggctgcctctccagatagga
cttgggatgatcttggaagcagttagggaccatgttcccgaggatcccatgtacaagttc
ggtctgcaagcgctgatgcaactcctagtccggttccgggaatggccccttttctgtcgg
cagttggtcctgatcccgggacttatgggaacagaagcgcacaagaaagccgaagaggtc
gtgatggagcatgaagaagatctttctcgcggcccgaacggagcgggaacgccacatgga
gtcggctatccaggagacacgtttcccaacggaaactctgaagaacaagccaatgcagac
cgccaggctcctgctttctcctccatcaatgtcgatcccccagcccccgagatggatttc
gaagaccccaacgaagtcgaacaggataaggtccagtttgttctcaacaacatcacggaa
gggacactggtatcgatgtccagcgagctgcgagagaccctggagcgaaggcatcagcaa
tggttcgcctgccagcttgtcgaggagcgtgccaagatgcaaccaaactaccatcatgtg
tatctcgaactggtccggctcttggaggactcgtctctttggagtgaggtgctgcgtgag
acgtacgtcagcgtgtcccgcatgcttaactcagaggctacgatgcaaaactctacggaa
agaacgcatctcaagaatctcggtggttggctcggtctcatgactcttgcgcgcgatcga
ccgatcaagcacaggaacattgcattcaagcagctactgatcgaagcacatgatacaaag
aggcttattgtcgtcatcccttttgtgtgcaaagtccttgtccaaggtgccacatcggcg
gtattccggcctcctaatccttggctgatggatattatccacctactgattgagctgtac
catcatgctgagttgaagttgaatctcaagtttgagattgaggtcctttgcaagggtttg
aatctcgatcacaagagcatcgagccctcgggagaaatcctcaaccgaccggtcatcgag
gaaccagcggatgttctgcctcaagaacagatagatgcctttgaaaacctatctctgaac
ggcatgggatccgccgtcggcgctggcctcaccccccaggccattgcaccgactattcca
gacctcggcccccttattaacattcccccaaccaacgagatggttgtcacctccacccga
ctccacgatattgtgcggactgctctcagccgagccctgcaggatatcattcagcctgtt
gtggaccggtccgtcactattgctgccatctcaacgcagcagatgattcacaaggatttc
gctaccgagcccgatgagaaccgcgtgcgaacctctgctatcaatatggtgaaagccaca
gcgggaagcctcgcgcttgttacgtccaaggagccacttcgagccaactttaccaattac
atgcggaacctgtcgaacgacattcctcaaggtctgccagagggtaccataatcatgtgc
gtcaactccaacctcgacttggcctgcaacattatcgagaagcaggcagaggaaagggcg
gtgcctgagattgaggagatgatggagggagaactggaagctcgtcgacgacaccgaatg
cagcgacccaacgagccttacttcgactcgagcctcagccgttgggccatgaccatcccg
cacccgtacaagctctcgccaaccagcaacggattgaacagcgaccagatggccatatac
gaggactttgctcgacaaccccgtagcgccgctgcccctgctccctcccacggtccctcg
acatccgacgcgactagatctctcgccaacgaggtcctgcaggagcaattcacggctatg
cccaacataccaactcctgccgaaacccctgcgattcagcaacacctaagcactcagatg
cagcagccctatgctcctgtgcacgcaggtgccaatgccatgtctaacggaagatcgcct
gggttcaccatggacgtccgcggcctagctgagcgagttaacaagctacttcaggaactc
ctgagggtagcaaccgaggctcgcgaggatcacttccaaggtctaccacgaccccatcct
gtcctggatgttgtcgatgctttggttcagcacatcatcaagacatcgcagaactcggag
gaattcgccatatacgccgctgagcaaatcagccagatcatcttctcgccagtggaggac
aatttgacgctcgagagcttggttcatgttttggagacgttgagaaagatatccggccct
gcacttaacaatcgtgtccgggctctgttcagccaacaaccagggcccaccttcttgagc
ctaccattgctggcggcattgactcggactgacttgttggattggaggaacatcgaccat
gccatgtccaaggccctccaagcccgtaaggagggctcgctcgacttcttggagcacatg
cttgaccttacacttctcaacaaccgccctatcgccctatatgctgattttgtcaggacg
ctagaggccgcgtgggcttggatcagagaagaccccggctcagctattggtcaacgagtc
aggtccaagctgatcggatctggattgtcgcatccttcgcagacagacgaccaggtgcta
tatcgacaagatcagatggactatgtgctggacgagtgggttcgtctgtgcaacaaccac
aacgcctcggacgcgtctggatcgatctttgtgcaacaactgcaggccaagcaggttatc
cgagaccgtgatgatttcttcgtctttctccgtaccgccatcgatacatcagttgagcga
ttcgagcatacgatgcaccctggcgccctcaccgatgtctacatcacggtcgatgcgctt
gccaaactcattggaacctttgtcagcttgcagtttgacacatcatccacgcgagcgtca
tttgtcgactcgaccatggcgctgatcacactggtcctcaaccatcacagcgtcaagcga
ggggagcagcttaaccagagggtcttcttccgactgctgtcgatgctcttgcatgagatc
cacgccatctcggaggacatttctgaagaggagcgccgcgacattctgctcaggatcgcc
tcccgacttgctggcatgggccctgctctaattcctggctttacctatggctggctctct
cttgttcagcaccgcgccttcatgccggtcctcctccaactgcccgatggtgccggatgg
ggactgttcgtcgacctcgtctgccagctctttgagtctcttggagatcaactgaaggtg
tttgaagtatccaacattgccaaggacatttaccgagccgcgttcaagcttctgatcatc
ctgcaacacgactttcccgatttcgtcgcggctaaccacgtcagaatctgtgccagcatc
ccgccgcactgcacacaattgatcaacgccgtgttggccgccaaccctcagcagagtccc
aagtttgtggagatgaatgccaagaaccgatccgacgagtccagggtccatcccggcctg
gtgaacgaggccactgtaatcctccgagatgctggcctacttggcgttgtcgaccaggcc
ctccagagtggcccgtcagaggacattgtggctaacatcacgcactccatgacacacaac
gctcccaaggtgacaacatatggccatgtgcccgttgcgatcaaccttgccgtcatcaat
gccgtggtcatctacattggacagcacgccgcagaccaggcagctcaggctggcacggct
gtcacagtgtctggagacgagtatgaggtttcaaccctgtccctcatcatccacgaactc
cctgccgaggccaggtactatcttttggtcagcgtggtgaaccagctacgcttccctaac
gcgcacaccgactttttcagccaggcgctcctctatatcttcagcaaggacctggaggat
cccgaggagacggagatccgacagggaataacgcgagtcctcctcgagcggttggttagt
ttctggccgcagccgtggggcctgctgtttacggttgtggagattgtcaagtgcgacaag
tacaatttctttgagctcccttttattaaggcgattcctgaggttgccgacaagtttggc
caggtggttcaacgaggttaa
DBGET
integrated database retrieval system
