Candidatus Nanopelagicus hibericus: B1s21160_03090
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Entry
B1s21160_03090 CDS
T05090
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
nhi
Candidatus Nanopelagicus hibericus
Pathway
nhi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B1s21160_03090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nhi03400
]
B1s21160_03090
Enzymes [BR:
nhi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
B1s21160_03090
DNA repair and recombination proteins [BR:
nhi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B1s21160_03090
Prokaryotic type
B1s21160_03090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ASY13320
UniProt:
A0A249K954
LinkDB
All DBs
Position
587308..587937
Genome browser
AA seq
209 aa
AA seq
DB search
MPVDLYSLIPPSWQILAEISSLVEISEKLTEDYLPRKELIFKAFELAPEQVKVLILGQDP
YPNAKHAVGLAFSTGDVRLLPASLKNIFKELENDLSIKRSTGDLSDWSNQGVMLLNMSLS
VVPGDPGAHSKIGWQKFTQPVVEYLASRGVVGLLWGNTAQEMSKYFKQGDLFTAPHPSPL
SAYRGFFGSKPFSKINNRLIEKGLTPIKW
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgttgacctttattcattaattccaccttcttggcagatacttgccgagatctct
agtctggttgaaatctcagaaaaactcactgaggattatttgccaaggaaggagctaatt
tttaaagcttttgagttggcaccagagcaagtaaaagtgttgatactgggacaagatcca
tacccgaatgctaaacatgcagttggattggctttttccaccggtgatgtccgcctacta
ccagcatcccttaaaaatatttttaaggaattggagaatgatttaagtatcaagcgaagc
accggtgacttgtctgattggtctaatcaaggcgtaatgttgctaaatatgtctctatca
gtggtgcctggtgatcctggagcacactcaaaaattggctggcagaaatttacccaacct
gtagttgagtatttggccagtaggggagttgttggccttttgtgggggaatacagcgcaa
gagatgagcaaatatttcaagcaaggtgatctctttaccgcacctcacccaagtccgtta
tctgcttatcgaggatttttcggatcgaaaccgtttagcaaaattaacaaccgactaatt
gaaaaaggcttaacaccgataaaatggtaa
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