Nocardia huaxiensis: H0264_08855
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Entry
H0264_08855 CDS
T07784
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
nhu
Nocardia huaxiensis
Pathway
nhu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nhu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H0264_08855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nhu03021
]
H0264_08855
03400 DNA repair and recombination proteins [BR:
nhu03400
]
H0264_08855
Enzymes [BR:
nhu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H0264_08855
Transcription machinery [BR:
nhu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H0264_08855
DNA repair and recombination proteins [BR:
nhu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H0264_08855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QLY32344
UniProt:
A0A7D6Z604
LinkDB
All DBs
Position
1937263..1940748
Genome browser
AA seq
1161 aa
AA seq
DB search
MLEGRILAVSTQTKAGIPGAPKRVSFAKIREPLEVPGLLDLQTESFAWLVGAADWRERAA
ARGDVNPVGGLEEVLEELSPIEDFSGSMSLSFSDPRFEEVKASIEECKDKDMTYAAPLFV
TAEFINNNTGEIKSQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVYFDDTIDKST
EKTLHSVRVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGLTTEEITERFGFS
EIMMSTLEKDSTPGQDEALLDIYRKLRPGEPPTKESAQTLLENLFFKEKRYDLARVGRYK
VNKKLGLNLDKPVTGSVLTKEDIVATIEYLVRLHQGDRMMTAPGGSEVPVEVDDIDHFGN
RRLRTVGELIQNQIRVGLSRMERVVRERMTTQDVEAITPQTLINIRPVVAAIKEFFGTSQ
LSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGLEVRDVHPSHYGRMCPIETPEGPNIG
LIGSLSVYARVNPFGFIETPYRKVENGRVTDEVKYLTADEEDREVRAQANSPVDADGNFV
ESKVLARKGNEEMEYVSPTEVTYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMQRQA
VPLIRSESPLVGTGMELRAAVDAGDVVVNQKAGVVEEVSADFITVMHDDGTRRSYRLRKF
ERSNQGTCANQRPIVDEGQRVEAGHVLADGPCTENGEMALGKNLLVAIMPWEGHNYEDAI
ILSQRLVEEDVLTSIHIEEHEIDARDTKLGAEEITRDIPNVSDEVLADLDERGIVRIGAE
VRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGESGKVIGVRVFSR
EDDDDLPPGVNELVRVYVAQKRKIQDGDKLAGRHGNKGVIGKILPQEDMPFLPDGTPVDI
ILNTHGVPRRMNIGQVLETHLGYIAKTGWQVEGAPDWAKNLPEEMLGQEADTNIATPVFD
GAREEELTGLLGSTLPNRDGERMINDDGKAILLDGRSGEPFPYPVAVGYMYILKLHHLVD
DKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGAAYTLQELLTIKSDDVVG
RVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLSSDGAAIEMRDGDDEDLERA
AANLGINLSRNEAATVDDLAQ
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
gtgctggaaggacgcatcttggcagtctccacccagaccaaggccggtattcccggagcc
ccgaagcgggtgtctttcgcgaagattcgtgaacctctcgaggtgccgggtcttctcgat
ctacaaaccgaatcattcgcatggctcgtcggtgcagcggattggcgggagcgtgcggca
gcgcgcggtgacgtcaacccggtcgggggcctcgaggaggtgctcgaagagctctccccg
atcgaggacttctcgggttccatgtccctgtccttctcggacccgcgcttcgaagaggtc
aaggcctcgatcgaagagtgcaaagacaaggacatgacctacgcggcgccactgttcgtg
accgcggagttcatcaacaacaacaccggtgagatcaagtctcagacggtcttcatgggt
gatttcccgatgatgaccgacaagggcacgttcatcatcaacggcaccgagcgcgtcgtc
gtgtcgcagctggtccgttcgccgggcgtgtacttcgacgacaccatcgacaagtccacc
gagaagacgctgcactccgtgcgtgtcatcccgtcgcgtggcgcgtggctggagttcgac
gtcgacaagcgcgacaccgtcggtgtgcgcatcgaccgcaagcgtcgtcagccggtcacc
gtgctgctgaaggccctgggtctgaccaccgaggagatcaccgagcgtttcggtttctcc
gagatcatgatgtccaccctcgagaaggactccaccccgggtcaggacgaggcgctgctg
gacatctaccgcaagctgcgtccgggcgagccgccgaccaaggagtccgcgcagaccctg
ctggagaacctgttcttcaaggagaagcgctacgacctggctcgcgtcggccgctacaag
gtcaacaagaagctgggcctgaacctggacaagccggtcaccggttccgtgctgaccaag
gaagacatcgtcgcgacgatcgagtacctggtccgtctgcaccagggcgatcgcatgatg
accgctcccggcggctccgaggttccggtcgaggtcgacgacatcgaccacttcggcaac
cgtcgcctgcgcaccgtcggcgagctgatccagaaccagatccgcgtcggtctctcgcgt
atggaacgcgttgtgcgcgagcgcatgaccacccaggacgtcgaggccatcacgccgcag
accctgatcaacatccgtcccgtcgtggcggcgatcaaggagttcttcggcacctcgcag
ctgtcgcagttcatggaccagaacaacccgctgtcgggtctgacccacaagcgtcgtctg
tcggcgctgggcccgggtggtctatcgcgtgagcgcgccggcctggaggtccgtgacgtc
cacccgtcgcactacggccgcatgtgcccgatcgagaccccggaaggcccgaacatcggc
ctgatcggttcgctctcggtctacgcccgggtgaacccgttcggtttcatcgagaccccg
taccgcaaggtcgagaacggccgcgtcaccgatgaggtcaagtacctcaccgccgacgag
gaggaccgcgaggtccgcgcccaggccaactcgccggtcgacgccgacggcaacttcgtc
gagtccaaggtgctcgcccgcaagggcaacgaggagatggaatacgtctccccgaccgag
gtgacctacatggacgtctcgccgcgccagatggtgtcggtggcgaccgccatgattccg
ttcctcgagcacgacgacgccaaccgtgccctcatgggcgcgaacatgcagcgtcaggcc
gtgccgctgatccgttccgagtcgccgctggtcggcaccggtatggagctgcgtgccgcg
gtcgacgctggcgatgtggtcgtcaaccagaaggccggtgtggtggaagaggtttcggcc
gacttcatcaccgtcatgcacgacgacggcacccgccgttcgtaccgcctgcgcaagttc
gagcgctccaaccagggcacctgcgccaaccagcgtccgatcgtggacgagggccagcgc
gtggaggccggtcacgtgctcgccgacggcccctgcaccgagaacggtgagatggcgctc
ggcaagaacctgctcgtggcgatcatgccgtgggagggccacaactacgaggacgcgatc
atcctgtcgcagcgcctcgtggaagaggacgtgctcacctcgatccacatcgaggagcac
gagatcgacgctcgcgacaccaagctcggtgccgaggagatcacccgcgacatcccgaac
gtgtcggacgaggtcctggccgatctcgacgagcgcggcatcgtgcgcatcggcgccgag
gtccgtgacggcgacatcctggtcggcaaggtcaccccgaagggtgagaccgagctgacc
cccgaggagcgcctgctgcgcgccatcttcggtgagaaggcccgcgaggttcgcgacacc
tccctgaaggtgccgcacggtgagtccggcaaggtcatcggcgtccgcgtgttctcgcgc
gaggacgacgacgatctgcccccgggcgtgaacgagctcgtgcgcgtttacgttgcgcag
aagcgcaagatccaggacggcgacaagctggccggccgccacggcaacaagggcgtcatc
ggcaagatcctcccgcaggaggacatgccgttcctgcccgacggcaccccggtcgacatc
atcctgaacacccacggtgtgccgcgtcgtatgaacatcggccaggtgctggaaacccac
ctgggttacatcgccaagaccggctggcaggtcgagggcgcccccgactgggccaagaac
ctgccggaggagatgctcggtcaggaagccgacaccaatatcgccaccccggtgttcgac
ggtgcgcgtgaggaggagctgaccggtctgctcggttcgactctgccgaaccgcgacggc
gagcggatgatcaacgacgacggcaaggcgatcctgctggacggccgctccggcgagccg
ttcccgtacccggtcgcggtcggctacatgtacatcctgaagctgcaccacctggtcgac
gacaagatccacgcgcgttcgaccggcccgtactcgatgatcacgcagcagccgctgggt
ggtaaggcgcagttcggtggtcagcgtttcggtgaaatggaatgctgggccatgcaggcc
tacggtgccgcttacaccctgcaggaactcctcaccatcaagtcggacgacgtggtcggc
cgcgtgaaggtgtacgaggcgatcgtcaagggcgagaacattccggagccgggtattccg
gagtcgttcaaggttctgctcaaggagcttcagtcgctgtgcctcaacgtggaggtgctg
tcctcggacggcgccgccatcgagatgcgcgatggcgatgacgaagacctcgagcgtgcc
gcggcgaacctgggtatcaacctgtcccgcaacgaggctgcgacggtcgacgacctggcg
cagtaa
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integrated database retrieval system
