KEGG   Nitrospira sp. KM1: W02_05470
Entry
W02_05470         CDS       T08344                                 
Symbol
nrdJ
Name
(GenBank) Vitamin B12-dependent ribonucleotide reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
nif  Nitrospira sp. KM1
Pathway
nif00230  Purine metabolism
nif00240  Pyrimidine metabolism
nif01100  Metabolic pathways
nif01232  Nucleotide metabolism
Module
nif_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Brite
KEGG Orthology (KO) [BR:nif00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    W02_05470 (nrdJ)
   00240 Pyrimidine metabolism
    W02_05470 (nrdJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nif03400]
    W02_05470 (nrdJ)
Enzymes [BR:nif01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     W02_05470 (nrdJ)
DNA repair and recombination proteins [BR:nif03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    W02_05470 (nrdJ)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TSCPD TACO1_YebC_N
Other DBs
NCBI-ProteinID: BCA53407
LinkDB
Position
565576..569121
AA seq 1181 aa
MRIERRFTRSGQSPYEGLKFVKRSSEIRNPDGSTVFKLDQIDIPESWSQLAIDILAQKYF
RKAGVPQHDERGLPLIGEDGNPVRGGEQDARQVFERLAGCWTHWGKAYGYFKSVEDSSAF
HDELCYMLAYQMAAPNSPQWFNTGLHYAYGLSGPAQGHYYVDPKTREVVKAANAFEHPQP
HACFIQSIEDDLVNENGIMDLWVREARLFKYGSGTGTNFSKLRGDGEALSGGGRSSGLMS
FLRIGDRAAGAIKSGGTTRRAAKMVCLDLDHPDIEEFIDWKVIEEQKVAAMVTGSKICAQ
RLNAVLKACHVVDSHGTPKIEVDPKLNSILKEALIAARRDTVPEAYIQRMFSYAQQGFTH
FVFHEYDTNWDGKAYQTVSGQNSNNSVRIPNEFFTALEADADWQLKRRIDGKIAKSIKAR
DLWDRIAWAAWICADPGTQYDTTINEWHTCPEDGRINASNPCSEYMFLDDTACNLASLNL
AQFFTPDGQFELEHFRHAVRIWTIVLEISVLMASFPSRSIAEKSYQFRTLGLGYANLGTI
LMRQGIPYDSPQAIAICGALTAIMTGEAYSASAEMAAELSPFPGFTKNRESMLRVIRNHR
RAAYHAPDEEFEDLTIRPMGIQAEHCPPDLLIAARRAWDRALELGTAYGYRNAQVTVIAP
TGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINQSLPPALKSLGYSELQVQEIVNY
CVGRQTLRGAPFINHDTLKQKGFDDAALARMESGLAQAFEIQFSFNKYVLGESFCREKLG
LTDLQLAEANFNMLKALGFTQEEIAAANDYCCGTMTVEGAPHLKTEHLPIFDCANRCGRI
GQRYIAVDAHIRMMAAAQPFISGAISKTINMPGDASLEDVKSAYLFAWKSMVKAVALYRD
GSKLSQPLSASTDTGKALETPTEVLAIAEKITERVLVRYLAKRRPLPTRRNGYTQKAVIG
GHKLYLRTGEYEDGTVGEIFLDMHKEGAAFRSLMNCFAIAISLGLQHGVPLEEFVEAFVF
TRFEPNGPVKLNDRIKMSTSIIDYIFRELAITYLDRYDLAQVREEDLRMDSMKKDEQDPE
CSDEEADPQTLASSINTDVFPSRHGMTPSRHGGNGHVNGTGNVAHKLELKRETITYTTEA
VKIARLQGYEGDPCQGCNEFKLVRNGTCLKCMGCGATSGCS
NT seq 3546 nt   +upstreamnt  +downstreamnt
gtgagaatagaacggcgatttacacgttccggacaaagtccctacgaaggcctgaagttc
gtgaaacgttcgtcggaaatccgtaaccccgacggctcgaccgttttcaagctcgatcaa
atcgacatcccggagtcctggtcgcaattggcgatcgatattctcgctcaaaagtatttc
cgcaaagccggtgtacctcaacacgacgagcgggggcttccgcttatcggggaagatggc
aatcccgtacggggaggagaacaggatgctcgtcaggtgttcgaacgacttgcgggatgc
tggacacactgggggaaagcgtacggatattttaagtcagtcgaagacagcagcgcgttc
cacgatgaactttgctacatgttggcctaccaaatggctgcgccaaattcgcctcaatgg
tttaacacgggactgcattacgcctacggattgtccggccccgcccaaggtcattactac
gtagatcccaagacacgcgaggtcgtgaaagctgcgaatgccttcgagcatccgcagcct
cacgcctgtttcattcagtccattgaagacgatctggtgaatgaaaacggcatcatggat
ctttgggtgcgagaggcgcggttgttcaaatatgggtcaggaacgggaacgaatttttca
aagttgcgtggcgatggcgaagcgctgtcaggaggaggacgctcgtcgggtttgatgtcg
tttctccgaattggtgaccgcgccgctggagccatcaagtccggaggcacgacgaggcgc
gccgcaaagatggtctgcctcgacctggatcaccccgatatcgaggaattcatcgattgg
aaggtaatcgaggaacagaaggttgccgccatggtgactggatcaaagatctgcgcccaa
cgtctcaatgcggttctcaaagcctgccacgtggtcgactcccacggaactccgaagatt
gaagtcgatccgaagttgaattccattctgaaggaggcgttgattgccgcacgccgggat
accgtcccagaggcgtacatccaacgcatgttttcctatgcacagcaagggttcacacat
ttcgtcttccatgaatacgataccaattgggatgggaaggcataccaaacggtctcggga
caaaactccaataacagcgtccgcatcccgaatgaatttttcaccgcgttggaagccgat
gctgactggcaactcaagcgccgcatcgacgggaagatcgccaaatcgattaaggccaga
gatctctgggaccgcatcgcttgggctgcctggatttgtgcagaccccggcacacaatac
gacacgacgatcaatgagtggcacacctgtccggaagacgggcgcatcaatgcctccaac
ccctgctcagaatacatgttcctcgacgataccgcgtgcaatctggcctctctcaatcta
gcccagttttttactccagacggccaatttgaactcgaacactttcgtcatgcagtacgt
atctggaccatcgttcttgaaatcagtgtgctaatggcttcgtttcccagtcgttccata
gctgaaaagagctaccagttccgtacgctcggactaggctatgccaatctgggaactatt
ctgatgcgccaaggcattccctacgattctccccaggccatcgctatttgcggcgcgctg
accgccattatgaccggagaggcctatagtgcctcggccgagatggctgccgaactttcg
ccatttccgggcttcaccaagaaccgtgaatccatgctgcgcgtgatccgcaatcatcga
cgcgcggcctatcacgctcccgatgaagagttcgaagatcttaccatcaggccgatgggc
attcaggccgaacattgcccgccggatttattgattgccgcccgaagggcttgggaccgc
gccctcgaattagggacggcatacggataccggaatgctcaggtgaccgtcatcgcaccc
accgggaccatcggcctcgtcatggattgcgatacaaccgggattgaacccgatttcgcg
ttggtgaagttcaagaagttggcaggaggcgggtacttcaagatcatcaatcaaagcctg
ccgccggctttgaaatcattgggttactccgaattgcaggtgcaggagatcgtcaattat
tgtgtcgggcggcagacgctccgcggagcgccgttcatcaatcacgacacattgaagcag
aagggatttgacgatgcggcattggccaggatggaaagcgggctggcgcaggcttttgaa
attcaattctctttcaacaagtatgttctcggcgagagcttctgccgagaaaagcttgga
ctgacggacctgcagctggctgaagcaaatttcaacatgctgaaagcgcttggatttaca
caggaagaaatcgccgctgccaacgactactgctgtggaacgatgacagtggaaggagcc
ccgcatttaaagaccgaacaccttccaatcttcgactgcgccaatcgatgcggccggatc
ggtcagagatacatcgcggtcgatgcgcatatccggatgatggctgccgctcaacctttt
atcagtggagcgatcagcaaaaccatcaatatgccgggagatgcgtcgcttgaagatgta
aagtctgcgtatctgttcgcatggaagagcatggtgaaggctgtcgcactgtatcgcgac
ggttccaagctgagccagcccttgtcggcatcgaccgataccggcaaagctctggaaaca
ccgactgaagtgctcgcaatcgccgaaaagattaccgagcgcgtcctggtgcgttatctc
gctaaacgccgtccgcttccgaccagacgaaacggctatacgcaaaaggccgtcatcggc
ggacataaattgtatctccggaccggtgaatatgaagacggtacggtcggagagattttt
ctcgacatgcacaaagaaggggcggccttccgcagcttgatgaattgttttgccatcgcc
atctcgttaggattacagcacggcgtgccattagaggaattcgtcgaggcattcgtcttc
acacgattcgagcccaacggaccggtcaaactgaatgaccgcatcaaaatgtcaacgtcg
atcatcgactatattttccgagagctggccatcacctatctggatcgatacgacctcgct
caggtaagagaagaagatctccgtatggattcgatgaaaaaggacgagcaggacccggag
tgctcagatgaagaggcggaccctcagactctcgcatcttcaatcaatactgatgtcttt
ccgtcccgtcacgggatgacgccttcacgtcatggaggaaacggacacgtcaatggcacc
ggtaacgtcgcgcacaaacttgaattgaagcgagaaaccatcacgtacacgacggaagcc
gtcaagatcgccagattgcagggatacgagggagatccgtgtcaaggttgcaacgaattt
aagctcgtgagaaacggtacgtgcctcaaatgcatgggctgcggagcgacgagcgggtgc
tcttaa

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