Nitrospira sp. KM1: W02_14140
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Entry
W02_14140 CDS
T08344
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
nif
Nitrospira sp. KM1
Brite
KEGG Orthology (KO) [BR:
nif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
nif03051
]
W02_14140 (pafA)
Enzymes [BR:
nif01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
W02_14140 (pafA)
Proteasome [BR:
nif03051
]
Prokaryotic proteasome
Bacterial regulatory particles
W02_14140 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Enolase_C
Motif
Other DBs
NCBI-ProteinID:
BCA54274
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Position
complement(1511201..1512595)
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AA seq
464 aa
AA seq
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MMPPGPMKQRIFGLENEYGLIFSPNGRIYLPMEKVLGYIFEGLIPNSWPSNAFLVNGARF
YQDTGCHPEYSTPECDNILELVVHDKAGERLLEACLPAAEERLREEGLSGEIYIFKNNTD
SLGNTYGCHENFLMRRDVDFWKVTEQLIPFFVTRQVFSGAGKVLKVSGKPQFFVSQRAQH
IHEKTSSSTTSSRSIINTRDEPHSDAERYRRLHIIVGDSNMSEVVTYLKVGTAALVLSMI
EEGYTVHGMELEDPVKAIREISRDPSVKRKVKLDDGRQMTAVEIQRVYLDRAQEYLAQQD
HDPILDDVWNRWAAILDKLEDDPMQLVREIDWVTKRHLIQSYIEKKGCGWDDPRVFLLDL
QFHDVKRTRGLYYLMESRGLIERVVEEDAVQRAMSTPPQTTRAKVRGDFIRFARAKNRSY
TVDWTYLKLNGYWEETILCMDPFSAVNRRVDELVAQVSGLRFYR
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgatgccccccggtcccatgaaacagcggattttcggccttgagaacgagtacgggctc
atcttttcgccgaacggccggatctatctcccgatggaaaaggttctcggatatattttc
gagggactgattccgaacagctggccgtcgaacgcctttctcgtgaacggcgcgcgcttt
taccaggacaccgggtgccatcccgaatattccacgccggaatgcgacaacattttggag
ttggtcgtgcacgacaaggccggcgagcgtctcctggaggcctgcttgcctgcggctgaa
gaacgtctgcgggaggaaggactgtccggcgaaatctatattttcaagaacaacaccgac
tcgctcggcaacacgtacggatgccacgagaatttcctcatgcgccgggacgtcgatttc
tggaaggtcaccgagcagctcatcccgttttttgtcacgcgccaggtgttcagcggagcg
gggaaggtcctgaaggtctcagggaagccgcaattctttgtctcgcagcgcgcgcagcat
atccacgagaagacctcgtcatcgacgacatcctcgcgcagcatcatcaatacccgcgac
gaacctcactcggatgccgagcgataccggcgtttgcacatcatcgtcggcgactccaac
atgtccgaggtggtgacgtatctgaaggtggggacggccgcgctggtcctctcgatgatc
gaggaaggctatacggtccacgggatggagctcgaagatcccgtcaaggcgatcagggag
atctcccgcgatcccagcgtcaaacgcaaagtgaagctcgatgacggacggcaaatgacg
gccgtggaaatccagcgcgtctatctggaccgcgcgcaggaatatctggctcaacaggac
catgaccccatcctcgacgatgtgtggaaccgctgggcggccattctggacaagcttgag
gatgatccgatgcagctcgtccgcgagatcgactgggtcacgaagcgccacctcatccaa
tcctatatcgagaaaaaaggctgcggctgggacgatcccagggtattcttgttggatctg
caatttcacgatgtgaaacgcacccgcgggctctactatctgatggaatcccgaggcctg
atcgaacgcgttgtggaggaagacgccgtgcagcgcgcgatgtccacgccgcctcagacc
acccgcgccaaggtccgcggagatttcatccgcttcgcgcgggcgaagaatcggtcctac
acggtggattggacctacctcaaacttaatggctattgggaagagaccatcctctgcatg
gacccattcagtgccgtcaatcgccgggtggacgagctcgtggcccaagtatccggactc
cggttttaccgatga
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