Nitratiruptor sp. YY08-10: NitYY0810_C0262
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Entry
NitYY0810_C0262 CDS
T10768
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
nih Nitratiruptor sp. YY08-10
Pathway
nih03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nih00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NitYY0810_C0262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nih03021
]
NitYY0810_C0262
03400 DNA repair and recombination proteins [BR:
nih03400
]
NitYY0810_C0262
Enzymes [BR:
nih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NitYY0810_C0262
Transcription machinery [BR:
nih03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NitYY0810_C0262
DNA repair and recombination proteins [BR:
nih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NitYY0810_C0262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
BCD59518
LinkDB
All DBs
Position
223534..224520
Genome browser
AA seq
328 aa
AA seq
DB search
MNKIKITPSVPTHMDVEKVKENAIRLHVYPYESGYAISVAHPLRRLLLSSTAGYAPIGLK
IEGVQHEFDSVRGMLEDVAAFIINLKNVRFKLRDSEQESITLEYEFNGPKELYGKDFENE
LVEVVTPDAFLATLNEDAELKISIIVQKGIGYVPSEMIRDLLPQGYIPLDAFFTPVKKAV
YEIEKVLVEDNPNYEKIVFDIETDGQVDPVTALKMAMNVMQSQMEIFTKDIEVTETSGQD
IENSDIFYQPLDTLDLSARSYNCLDKAGIKYVGELLLMSSEALKSIKNLGKKSLDEIQEK
LSELNVDITKLSEKEKESILKKIEQNKS
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaataaaaataactccatctgtaccgacacatatggatgtagaaaaagttaaa
gagaatgccatcagattgcatgtatatccatatgagagcggatacgccatttctgtggct
catccgcttcgaagacttcttcttagcagtacggctggatatgcacctattggattgaaa
attgaaggcgtacagcatgaatttgacagtgtacgtggtatgcttgaggatgtggcagct
ttcattatcaatcttaaaaacgtccgctttaagctcagagatagtgagcaagaaagcatc
acccttgagtacgaattcaacgggccaaaagagctttatggtaaagattttgaaaatgaa
ttagtcgaagttgtcactcccgatgcttttcttgcaacattgaacgaagatgctgagcta
aaaattagcatcatagttcaaaaagggattgggtacgttccgagtgagatgattcgagat
ctattgccacaaggctatattccattagatgctttttttactcctgtgaaaaaggcggtc
tatgagatagaaaaagtacttgtcgaagataatccaaactatgaaaaaatcgtttttgat
atagaaacagatggacaagttgatccagtgaccgctttgaaaatggcaatgaacgtgatg
caaagccaaatggagatttttacaaaagatattgaagtaacagagacttcagggcaagat
atagaaaacagcgatattttttatcaaccattggatactcttgatttgagtgctcgaagt
tacaactgcttagataaagcagggatcaagtatgttggcgagctccttttgatgagtagc
gaagcattgaaatcgatcaagaacctcggaaaaaaatcccttgatgagattcaagaaaaa
ctttccgaactcaatgtggatattacaaaattgagtgaaaaagagaaagagtccattctt
aaaaaaatagaacagaacaagtcctaa
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