KEGG   Nitrincola iocasae: F5I99_15970
Entry
F5I99_15970       CDS       T06212                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
nik  Nitrincola iocasae
Pathway
nik02024  Quorum sensing
nik03060  Protein export
nik03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:nik00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    F5I99_15970
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    F5I99_15970
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    F5I99_15970
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:nik02044]
    F5I99_15970
Enzymes [BR:nik01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     F5I99_15970
Secretion system [BR:nik02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   F5I99_15970
  Eukaryotic Sec-SRP protein
   F5I99_15970
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 CbiA cobW AAA_30 Zeta_toxin AAA_33 Helicase_RecD AAA_31 APS_kinase ABC_tran AAA_16 YqeC 6PF2K ATP_bind_1 Thymidylate_kin TctA ArsA_ATPase AAA_14 KTI12
Other DBs
NCBI-ProteinID: QEW07867
UniProt: A0A5J6LGY1
LinkDB
Position
complement(3461862..3463244)
AA seq 460 aa
MFDNLTQRLTQTLRSVTGQARLTEENIKGTLREVRMALLEADVALPVVKEFINNVKERAV
GQEVSKSLSPGQVFVKIVNEELIKVMGEANAELDLSTTPPAVVMMAGLQGAGKTTSVAKL
SRFLKERKKKKVLVVSADIYRPAAIRQLETLAAEVGVEFFPSDSSQKPVDIVNSAIRHAR
LQHHDVLLVDTAGRLAIDEAMMAEIRDLHAAVKPVETLFVVDAMTGQDAANTARAFNDVL
PLTGVILTKTDGDARGGAALSVRHITGKPIKFLGVGEKTDALEPFHPDRIASRILGMGDV
LSLIEEAEQKIDKVKAEKLAKKMTKGKGFDLEDFREQIQQMSNMGGMMGMLEKLPGMGQM
AQAAQAAQAEKGMQQFEVIINSMTPKERRNPDIISGSRKRRIAVGSGTQIQDVNRLLKQH
KQMAKMMKKFGSKSGMTKLARGMKGMMPPGMGGGGGFPRF
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgtttgataatcttacacaacgattaacacagacgttacgtagcgtcaccggtcaggcg
cgcctgacggaagaaaatattaaaggcaccctgcgtgaagtgcgtatggcgctgcttgaa
gcggatgtggctttgccagttgttaaagaattcattaacaatgtcaaagagcgtgcggtg
gggcaggaggttagtaaaagcctgagtcccgggcaggtcttcgtcaaaatagtcaacgaa
gagctgatcaaggtgatgggcgaggctaatgccgagctcgacctgagtactacacctcca
gcagtggtgatgatggctggtttacagggcgcgggtaaaaccacctctgttgccaagctg
tcccgttttctgaaagagcgcaaaaagaaaaaagtgctggtggtatcggctgatatttat
cgaccggccgctatacgtcagttagaaacactggcggctgaagtgggcgtggagtttttc
ccctcggatagcagtcagaagccagtagatatcgtcaatagcgctattcgccatgcgcgc
ctgcaacaccatgatgtgctgctggtggataccgccggtcgtctcgccattgatgaggcg
atgatggctgagattcgtgatctgcacgctgcggttaagccggttgaaaccctgtttgtc
gtcgatgccatgaccggtcaggatgctgccaataccgcacgtgctttcaatgacgtgctg
ccattgactggtgtgattctgaccaaaacggatggcgacgcacgtggtggtgcagctttg
tcggtgcgtcatattaccggtaagccgatcaagttccttggcgtgggtgaaaaaaccgat
gcactggagcctttccatcccgatcgtattgcctcgcgtatccttggtatgggcgatgtg
cttagtctgatcgaagaagctgagcagaagatcgacaaggttaaggctgagaagcttgcc
aagaaaatgaccaaaggcaagggctttgatctggaggatttccgtgagcagatccagcag
atgagtaatatgggtggcatgatgggcatgctggaaaaactgccgggtatggggcagatg
gcacaagcggctcaggcagcgcaggctgaaaaaggcatgcagcagtttgaagtgatcatc
aactccatgacacccaaggagcggcgtaacccggatattatttctggctcgcgcaagcgt
cgtattgctgtgggttcgggtacccagattcaggatgtaaaccgtctgctgaaacagcat
aagcagatggctaaaatgatgaaaaaatttggcagtaagtcaggtatgaccaagctggcg
cgtggtatgaaaggcatgatgccacccggtatgggcggcggcggtggctttccgcgcttc
tga

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