Niallia sp. Man26: L8T27_004240
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Entry
L8T27_004240 CDS
T09959
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
nil
Niallia sp. Man26
Brite
KEGG Orthology (KO) [BR:
nil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nil03400
]
L8T27_004240 (addA)
Enzymes [BR:
nil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L8T27_004240 (addA)
DNA repair and recombination proteins [BR:
nil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
L8T27_004240 (addA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PDDEXK_1
DEAD
AAA_12
ResIII
Med15_M
Motif
Other DBs
NCBI-ProteinID:
UPO88385
LinkDB
All DBs
Position
1:815400..819125
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AA seq
1241 aa
AA seq
DB search
MKSIDIPPKPLDATWTDDQWKAISLSGNDILVAAAAGSGKTAVLVERMIRKIVSDNPINV
DELLVVTFTNASAAEMKHRIGDVLEKEINANPKSQHLKKQLVLLNKAHISTIHSFCLEVI
RKYYYMIDLDPGFRIADETEAQLMRDECVEDLFEEEYGQSENSAFFDLVDAFTNDRSDDA
LQKIIQEVYDFSRANPSPSAYLESLANMYDIEETAAIEDLPFAKELLADIGLQLDGVRQL
LEYGLELTKRPFGPAPRAGNFVDDLHLLDIIQRAKDDSWKTMYDAMQTLKFSRAKACKGD
EYDPALIEEAQKVRDRAKKILQELQSELFGRLPEGFIKDMREMKVHVETLTRLVASFSDR
FQRMKSEKGLVDFADLEHYCLEILREPEAKELVPSVAAVQYRKQFKEVLIDEYQDVNMVQ
ESILQLVTADSETAGNLFMVGDVKQSIYRFRLAEPNLFLSKYNRYQADENTGYKIDLARN
FRSRKEVLDGTNYLFKQIMGVKVGEIEYDKDAELAKGAAYPEDAAFPIELALVNQNSAAT
TEEGDGETGEFDAQEMEQSQLEARVIAQKIRELFDHKQEVYDAKTKSYRPAMYKDMVILL
RSMTWAPAIMEELKQFNIPTYANLTTGYFESTEVNIMMSLLKVIDNPYQDIPLAAVLRSP
IVGLTEEDLSRIRIEKKQGAFYDAVKAYMSVNKNDALQEMLAPFFELLNEWRTEARRGAL
SDLIWRLYRDTHFYDFVGGLPGGNQRQANLRALFDRARQYEATSFRGLFRFLRFIERMRD
RGNDLGAARALTEQEDVVRIMTIHSSKGLEFPFVFLAGIGREFNTMDLRKPFLLDKDLGF
ATKYIHAQKRISYPSLAQIAFTKKKRMELLAEEMRVLYVALTRAKEKLVLIGSVKDIEKS
KQKWAQAAGHSNWLLNEFDRASARSYLDWIGPALVRHKDASGIHLETWMEKGEVSVHPSA
WEIRILQKEDILKLTVDDLEEQESWLEKVTSGKVMDISSEYKEQIQKTLAWKYLYPHGTI
YRSKQSVSELKRQSERLDEQSGTEIQPRRKTIWNRPKFMQEKKLSPAEKGTAMHMVMQHI
RLDEAITEDSIRQLVDEMQTKELLTPEQAEAIEAGQIVSFFQSELGERMRNAKKLVREIP
FNIAYPSSSVYKDWQGENEPILVQGIIDVYFEDEKGTVLLDYKTDSILDRFKGGYMEAKP
VLEARYRVQIDLYADSLEKILKKKIDEKYLFFFDGANILPM
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtattgatataccgccgaaaccgcttgatgcgacctggacagatgatcaatgg
aaagcaatcagcttgagtggaaatgatattttagtggcagctgcggcaggatcaggaaaa
acagccgttcttgtagaaagaatgatacgcaagattgtttctgataatccaataaatgtt
gatgagctgcttgttgttacatttactaatgcatcagcggcagaaatgaagcatcgtatt
ggagatgtgcttgaaaaggagataaatgctaatccaaaatcacagcacttgaaaaaacaa
ttagttctattgaataaggcccatatatcaactattcattctttttgcttagaagtaatc
cgcaaatattattatatgattgacctggaccctggctttcgcattgctgatgagacagaa
gcacaattgatgcgggatgaatgtgtggaagatttatttgaggaagaatatggacaaagt
gaaaattcggcattttttgatttagttgatgccttcacaaatgatagaagtgatgatgca
cttcagaaaatcatacaggaagtgtatgatttttcacgggcaaatccttctccgtcggcg
tatttggagtctttagcaaatatgtatgacatcgaggaaacggcggcaattgaagacctt
ccatttgcaaaagagctgcttgcagatatagggcttcaattggacggagttcggcagctt
ttggaatatggattagaattgacgaagcgtcctttcggtcctgcgccaagagcgggcaat
tttgttgatgatttacatcttttggatattattcaaagggcgaaagacgactcatggaaa
acgatgtatgacgcgatgcaaacattgaaattctcaagagctaaggcatgcaaaggggat
gagtatgatcctgctttaattgaagaagcccaaaaggtcagagatagagcgaaaaaaata
ttgcaggagctgcagagtgaattattcggcaggctgcctgaaggttttataaaagacatg
cgagaaatgaaagtccatgtggaaacattgacgagacttgtagcttccttctccgatcgt
ttccaaagaatgaaatcggaaaaaggcttagtcgattttgctgacttagagcattactgt
ttggagattttacgtgagcctgaagcaaaagagcttgtgccgtctgtggcagcagtgcaa
taccgcaagcagtttaaggaagtgctgatagatgagtatcaggatgtcaacatggtgcag
gagtccatattgcagcttgttacagcagacagtgaaacagcgggaaatctgtttatggtt
ggcgatgtaaaacaatctatctatcgattccggcttgcagaaccaaacctgtttttatct
aaatataatcgttatcaagcagatgagaatacaggctataagattgaccttgccagaaat
ttccgaagcagaaaagaggttttggacggtacaaactatctgttcaagcagataatgggg
gtcaaagtcggcgaaattgaatatgacaaagatgctgagttggcaaagggagctgcttat
ccagaggatgctgcttttccaattgaattggctcttgttaaccaaaattctgcagccacg
actgaagaaggtgacggagagactggtgaattcgatgcacaggaaatggagcagtctcag
cttgaagcacgggtgattgcccaaaaaataagagagctattcgatcacaagcaggaagta
tatgatgcaaaaacgaaatcgtaccgtccagctatgtataaggatatggtgattctactt
cgttcgatgacatgggcgccagccatcatggaagaattaaagcaatttaatattccgaca
tatgctaatttgacgacaggctatttcgaatcaacggaagtcaacatcatgatgtcattg
cttaaagtaatagacaatccatatcaagatattccgttggctgctgtgctccgttcccct
atagtcgggttaacagaagaagacttgagcagaattagaattgaaaagaagcaaggagca
ttctatgatgctgttaaagcatatatgagtgttaacaaaaatgacgccttgcaggagatg
cttgcaccattctttgaattattgaatgaatggagaacagaggcaaggcgtggagctttg
tcagatttgatttggaggctctatagagatacgcatttttatgattttgtcggcggattg
cctggaggcaatcagcgccaggctaacttgcgggcattgtttgaccgggcccgtcaatac
gaggcaacctctttccgcgggcttttccgctttttacggtttattgaacggatgagagac
agagggaatgacctgggggcagccagggccttaacagagcaggaagatgttgtccgaatc
atgacaatccacagcagcaagggactggaatttccgtttgttttccttgctggcattggc
agagaattcaacacaatggatttgcgcaagccgttcctgcttgataaagatctcgggttt
gcgacaaagtatattcatgctcaaaaacgaatctcttacccgtctcttgcacaaatagca
tttacgaagaagaagcgaatggagcttttagcagaggaaatgcgggtgctatacgtagcg
ctgacaagagcgaaggaaaaattagtgctgatcggctctgttaaggatatcgagaagtct
aaacaaaaatgggcacaagctgctggacattccaattggctgttaaatgagttcgacaga
gcatctgcccgctcttatttagattggattgggccagcccttgtaagacataaggatgca
tctggcatacatctggaaacatggatggaaaaaggagaagtgtctgtccatccttcagca
tgggaaatccgaattcttcaaaaagaagatattcttaaacttactgtagacgatttggaa
gaacaagagagctggctggaaaaggtgacaagcggaaaagtgatggacatttcctctgaa
tataaagagcaaatccaaaaaactctcgcctggaagtatttgtacccgcatggcacaata
tatcgttccaaacagtccgtgtccgagttgaaaaggcaaagtgaacggttggatgaacaa
agcggcacagaaattcagccacgtcgcaaaacgatttggaacagaccgaagtttatgcag
gagaaaaagctgagtcctgcagaaaaaggaacagccatgcatatggtgatgcagcatatc
cgattggatgaagctataacagaagacagtatcaggcagcttgttgatgaaatgcagaca
aaggagcttctgacaccagaacaagcagaggcaattgaagcagggcagattgtctccttc
ttccagtcagaacttggagagcgcatgcgtaatgcaaaaaagcttgttcgtgagattcca
ttcaacattgcctatccgtcaagctctgtgtataaggattggcaaggagagaacgagcca
attttagtccaaggtatcatcgacgtctattttgaggatgaaaaaggcacagtgctgctt
gattataaaacagattctattctagaccggtttaaaggcggatatatggaggccaagcca
gtattagaagcgcgctatcgtgttcaaattgacttgtatgctgattcactggagaaaatt
cttaagaaaaaaatcgatgaaaaatatttattcttctttgatggagcgaatatcttaccg
atgtaa
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