Candidatus Nitrospira inopinata: NITINOP_2867
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Entry
NITINOP_2867 CDS
T04169
Symbol
kdsD
Name
(GenBank) D-arabinose 5-phosphate isomerase
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
nio
Candidatus Nitrospira inopinata
Pathway
nio00541
Biosynthesis of various nucleotide sugars
nio01100
Metabolic pathways
nio01250
Biosynthesis of nucleotide sugars
Module
nio_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
nio00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NITINOP_2867 (kdsD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
nio01005
]
NITINOP_2867 (kdsD)
Enzymes [BR:
nio01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
NITINOP_2867 (kdsD)
Lipopolysaccharide biosynthesis proteins [BR:
nio01005
]
Lipid A
NITINOP_2867 (kdsD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
CBS
SIS_2
Motif
Other DBs
NCBI-ProteinID:
CUQ67839
UniProt:
A0A0S4KVL5
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All DBs
Position
1:complement(2798595..2799635)
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AA seq
346 aa
AA seq
DB search
MERGKSRKLGSSATPVSSSVSNDSGRPESLEEGRRVLEIEARAVLALVDRLDETFVRAVD
VLERCEGKVVVCGMGKSGLIGQKIAATLASTGTPSFFVHPAEGVHGDLGMLARGDALIAI
SNSGETQELLQVLPYVERMGMPVIALTGRMNSTLAKHADVALDVSVAEEACPLGLAPTAS
TTATLAMGDALAVALLQRRGFKREDFALFHPGGTLGRRLLVTVKDLMHAGSAVPRVKEST
AGMAAILEMTEKKLGMTTVVDERNELVGVITDGDVRRFLQRGGDVVHATAKDLSTGNPKT
IGPDDLAAKAVEIMERFSITTLVVTAGDRRILGVIHLHDLLKNGIV
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggaacgcggcaaatcgagaaaactagggtcatccgccacgccggtctcgtcgtcggtg
tcgaacgatagcgggcgtccggagagtcttgaagagggcaggcgcgtgctcgagatcgag
gcccgcgcggtgctcgccctcgtcgatcggctggacgaaacgttcgtccgggccgttgat
gtgctcgagcggtgcgagggcaaggtcgtggtgtgtggcatgggcaaatcgggtctgatc
gggcaaaagatcgccgcgacgctcgccagcaccggcacgccctcgttctttgtccacccc
gccgagggggtgcacggggatctcggcatgttggcacggggggacgcgctgatcgccatt
tccaacagcggagagacgcaggagttgcttcaagtgctgccgtacgtcgaacggatgggg
atgccggtgatcgcgctgacggggcggatgaattccacgctggccaaacacgccgacgta
gcgttggacgtgtcggtggcggaagaggcctgtccgttgggattggcccctaccgccagc
accaccgccaccctggccatgggcgatgcgctcgccgtcgcgctgttgcagaggcgcggc
ttcaaacgggaggattttgcgctgtttcatccgggtgggacgctcggccgtcggttgctc
gtcacggtcaaggatctcatgcacgccggctcggccgtgccgagggtcaaggaatccacc
gcgggcatggccgccattttggaaatgacggagaagaagctcggcatgaccaccgtcgtg
gacgaacgaaatgagctggtcggcgtcatcaccgacggcgacgtgcggcggttcctccag
cggggaggagacgtcgttcatgcgacggcgaaagacttgagcacggggaatcccaaaacg
atcgggccagatgatttggcggcgaaagcggtcgaaatcatggaacggttttcgatcacc
acgctcgtcgtcacggcaggcgatcgccgcatcctgggcgtgatccatctgcacgatctc
ctcaaaaacggaatcgtatga
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