Candidatus Nitrospira inopinata: NITINOP_3257
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Entry
NITINOP_3257 CDS
T04169
Symbol
ffh
Name
(GenBank) Signal Recognition Particle (SRP) component with 4.5S RNA (ffs)
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
nio
Candidatus Nitrospira inopinata
Pathway
nio02024
Quorum sensing
nio03060
Protein export
nio03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
nio00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
NITINOP_3257 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NITINOP_3257 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NITINOP_3257 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
nio02044
]
NITINOP_3257 (ffh)
Enzymes [BR:
nio01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
NITINOP_3257 (ffh)
Secretion system [BR:
nio02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
NITINOP_3257 (ffh)
Eukaryotic Sec-SRP protein
NITINOP_3257 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_30
AAA_22
MeaB
AAA_31
ATP_bind_1
ABC_tran
Thymidylate_kin
Fer4_NifH
Zeta_toxin
VirC1
6PF2K
AAA_16
ResIII
nSTAND3
AAA_25
AAA_18
APS_kinase
MobB
LisH_TPL
ArsA_ATPase
AAA_19
YqeC
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
CUQ68229
UniProt:
A0A0S4KVT3
LinkDB
All DBs
Position
1:complement(3157290..3158759)
Genome browser
AA seq
489 aa
AA seq
DB search
MTCKKRFYRLLLPFSQFFRGDRRSLIQGFDGLFLCEPMFETLSQKFEAILKKLRGQGVLT
EQNIAEALKEVRLALLEADVNFKIVKDFIERVRQKAVGQEVLQSLTPGHQVVKIVLDELA
EMMGGERSGLALSSKPPTVVMLVGLQGAGKTTTCGKLARFYKSQGKRVLMVAADPRRPAA
GEQLSALGRDLGIEVYRVDRTQGAPPVSRSEVVEICQAGVEQARAQGFDLAVLDTGGRLH
IDDELMEELVAAKTAVAPQEVLLVADAMTGQDAVAMASRFDQQVGLTGVILTKVEGDARG
GALLSIRAVTGKPVKFLGVGEKLDALEAFHPDRMASRILGMGDVLSLIEKAQANFSQQQA
EEARKRLTTNTFTLEDFRAQLGQMSRLGSMDQILNLLPGGQKLKGMIEGDKPEREIRRVV
AIIDSMTISERRDHTIINGNRKKRIARGSGTSVQEVNRLIKQFLSAKKLAKAMTGSGARR
HLAQLMRSM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
ttgacttgcaagaagcggttctatagactgctcctaccgttttcccagttttttcgaggc
gatcggagatctctgatccagggcttcgatggcctctttctttgtgagcctatgtttgaa
acgttaagtcagaagtttgaagcgatcttgaagaaactccgcgggcagggcgtgctcacg
gagcaaaatatcgccgaggcgctcaaggaagtccgactcgcgctccttgaagccgacgtg
aattttaaaatcgtcaaagacttcatcgaacgggttcgacagaaagccgtcgggcaagaa
gtcttgcaaagcctgactcccggccatcaggtcgtcaagatcgtgttggacgagttggcc
gagatgatgggaggcgagcgatcgggacttgcgctcagctcaaagccccccaccgtcgtc
atgctggttgggttgcagggagcgggaaaaaccacgacctgcggcaagttggcccgcttc
tacaaaagtcaaggcaagcgcgtgctgatggtcgccgccgatccccgccggcccgcggcg
ggagagcaattgagcgcactaggacgcgatttgggcatcgaggtgtatcgtgtcgatcga
actcagggagctccaccggtttcccgatcggaggtggtggagatttgtcaagccggggtc
gaacaggcgcgggcgcagggcttcgatctggcggtcttggatacgggcgggcggctgcac
atcgacgatgaactgatggaggagctggtggccgccaagaccgcggtggctcctcaggaa
gtgttattggtcgccgacgccatgaccggccaagacgcggtcgcgatggcgagtcggttc
gatcaacaggtcggcttgaccggcgtcattctgacaaaggtcgagggcgacgcgcgcgga
ggggcgttgttgtcgattcgggccgtgaccggcaagccggtgaagtttctcggcgtgggg
gagaagcttgacgccttggaggcatttcatccggatcgcatggcctcgcgcattcttggc
atgggagacgttctgtcgctgattgaaaaagcgcaggccaatttttctcaacagcaggcc
gaagaagctcggaagcggcttaccaccaacacgttcacgctggaagattttcgcgctcaa
ttggggcaaatgagtcgtctcggctcgatggatcagattctcaacctgttgccgggcggg
cagaaactcaagggaatgatcgagggcgacaagccggaacgggaaatcaggcgggtggtc
gccatcatcgattccatgacgatcagcgagcgtcgcgatcacacgatcatcaatggaaac
agaaaaaaacggattgctcgaggaagcggcaccagcgttcaagaggtcaatcgtttgatc
aagcaatttttgtcggcgaaaaaattggccaaggccatgaccggctcgggcgcgcgccga
caccttgcccagcttatgcggtcgatgtag
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