Nymphalis io (European peacock): 126780443
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Entry
126780443 CDS
T08495
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
niq
Nymphalis io (European peacock)
Pathway
niq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
niq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126780443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
niq03019
]
126780443
Messenger RNA biogenesis [BR:
niq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126780443
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
126780443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
126780443
NCBI-ProteinID:
XP_050360881
LinkDB
All DBs
Position
Z:3277267..3298518
Genome browser
AA seq
2434 aa
AA seq
DB search
MNLDPLTFSLSQINYLVANLSKKNFKQTSQELSQIVSHYGLEAENQLLRCLLTEAAKTSW
DNDRPGTAYSVHATLLAQHLTSLLNHPAKSTVVCRTLDHPTRSLQKVLKPANTLLPRLAR
LLKLTTAQDVAFSLVLRRNSSKPEIVSIAKNHLKKRFLDFVQCYLDAERGHQVERAGLQE
CSPEVLQTLLTSLAYDNFRLAAVTKDLFLKRLRVDFPREVVPIVLAPLLYPDDTQTPLEE
MTTSDDMATAMMDNSLVEIIRDIGYTFTASVEDCKNNMINFGAREPTAIDIARIISIMVR
YHATLPEGPQIQTPGNYWMNHEAKKEAIAHGHPETWNAEIFVQTLKELASNLNWKEVILQ
LDHPEFIVPDRQGLSLLFTILRLGLQSAGYPATIFPVEYLCRKWANLEGQMSLITNILKH
PDIFSFADHPFHPVSIDLLKSPPETDNKEISTWRCLYLVELLLYAAERGYYMQVQELFKF
PLQHCPDILLLALLQINPPVTVFRQEIITMLIPVFLGNHPNSGIILQHAWHSQNPNIKPI
IMHAMAEWYLRGESDQSKLSRILDVAQDLKALSLLLNVQSIPFVIDLACLASRREYLKLD
KWLTDKIRDHGETFVSAMVKFLQRRCPQVLGKVPEEQLPKAAQLPPETIGTMLACLQLCI
PNVQQELQEAIYNVIANCQTLILSKVRPGIPGIARPHTRVLETPFNPAGLGGQLFTPHVD
AIANLTPNVANMTLGAPANTAFAMPGTLGPLVAAPASPSRLMGAGPNSPFAMMQMQHNPN
VANMSALARMPPVPAMDKPRLPDPIHFPEIMHNVSKEIEDEANSYFQRIYNHPPHPTLSI
DEVLEMLKKFQDSSNKREREVFSCMLRNLFEEYKFFPQYPDKELHITAQLFGGIIEKGLV
PSYVSLGLALRFVLDALRKPEGSKMYYFGIAALDRFKSRLKDYHKYCEHVRAIPHFSEFP
PHLVEYIEYGLQSQEPPTKPQGAVLPASLAAMLNQSAVVTVSAPYRAVVCVHNPISVISK
VTNCAAGGIGSRPSIANATNIDTLLTATDRDEKITAPPEAVQDKTAFIFNNLSQLNLQTK
CEELKEIITDEYYQWLSQYLVMKRASIELNFHALYSNFLDVLKIREINKMVTKETYRNIR
VLLRSDKGIANFSDRSLLKNLGHWLGMLTLARNQPILYIDLDLKALLLEAYHKGQQELLY
VVPFVAKVLESCAKSIVFRPPNPWSMALMNVLAELHQEPDLKLNLKFEIEVLCKNLSLDL
TDLKPSLYLKDPEKLRTIEFQLSQPKPIKEPTNVIPVNQAVVQVPQIQMMPPQPPMIPIE
EMSGVVPTPTSGMIPNDPSMMGVLGLPEPRFNYLDVNVSSTSAFGQKISFNPHIILFQNY
PHLKQFVKPAIERSIQEWIHPVVDRSIKYALTTCEQIIRKDFAFDPDEVRMRTCAHHMMR
NLTAGMAMITCREQIISTISTNLKAAFITALIPTTPQQLNVLQKDIIESAAAVLATENME
LACAFIQKTAVEKALPELDKRLVNDYEMRKIARQEGRRYYDPIILTYQTERIPERVRLRV
GGPTDLQISVYEEFACNIPGFMPVRDAGMFIPKPSAQEQMPQMTFSQVMNPTQVYGTDEM
GTLITTAELFLSNALTVPLFAVQATNTHTLLECLIIARRNRDIVSGYTLLQRAVEGLLDG
HIVQPGTNPEHAEMMTRYRDIHLRVLKLLEDARVYGHAWTTKQITYCVTECRDELRYNLE
AIDCLIRNHLINLPQYDLSLAHLMDNGNNYLAVAFAMQLVQLYLVDDRNNLYATESDLYH
TTETLVRMMSNSRQPPPEGLGSLIETIRINQDPSTYLGERSPLGPTAHIHNGILQVRARD
YEDPPGLQEKTENLLREWRNVLLSPLTELEIGQNFNIYVHRMNMNGILKSDDMITRFFRI
ATQMCVENVYQLLTEDRMNPPPVPPKREKYYAICDSFIKLVSLLIKNTADGGNPTPKLNL
LNKILGIIAGCLLQDHEEHGANFQQLPYHRLLLILFLDMNMAEPVLESINYQVLTAFCHT
LRIIRPSVAPGFCYAWLEIVAHRAFVNRVLAVTPQQKGWGMYSTLLIDLFKFLDPFLRNT
ELATPVMMLYKGTLKVLLVLLHDFPEFLCDYHYGFCDEIPPNCIQMRNLILSAFPRNMRL
PDPFTPNLKVDLLAEITLPPRAVINYATIIPSSQFKKDLDAYIKARAPVTFLSELRSNMQ
VVNEPGRRYNSQLMNAVVLYVGTQAIAHIRSKGQTPNMTTIAHSAHMDIFQNFTVDFDYE
GRYLFLNAIANQLRYPNSHTHYFSCCLLYLFAEANSEAVQEQITRMLLERLIVNRPHPWG
LLITFIELIKNPIYKFWSHEFVHCAPEIEKLPRGAAKRGAPATATFHFSTCKTRLTMEQI
IQKVNSILNPCPESAPPEGTDGTSEKVVSDSVNQ
NT seq
7305 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggaccctttaacgtttagcttatcacaaatcaattatctcgttgcaaattta
agtaagaagaatttcaagcaaactagtcaagagttgtctcagattgtcagtcactatggc
ttggaagcagaaaatcaactgctgaggtgtctgcttactgaggcggcgaagacgtcgtgg
gacaacgaccgtccaggaactgcgtacagtgttcatgcgactctactagcacagcattta
acgtcgctcctgaaccaccctgcaaagtctactgtggtctgtcggacactagatcatcca
acacgatcactacaaaaggtattaaaacctgccaatacactccttcctcgattagcaaga
ttgctgaaactgacaacggcccaagatgttgccttctcattggtgttgagaagaaattca
tctaaacctgagattgtttctattgctaaaaatcatttgaagaaacggtttttagacttt
gttcagtgttatcttgacgcagaacggggacatcaagttgagcgtgcaggtcttcaggaa
tgcagccctgaagttttgcaaactctcttaacaagcctcgcgtacgacaattttcggcta
gccgcagttactaaggacctgtttctgaaacgtttacgcgttgattttccgcgcgaagta
gtgcctatagtgttagcaccgcttctttaccctgacgatacacaaacacccctcgaggaa
atgaccacatctgacgacatggcaacagctatgatggacaactccctcgtagaaataatt
cgagacattggttatacattcacagcttcagtagaagactgcaaaaacaacatgattaat
tttggagcccgggagccaacggctattgacatagcaagaataatttcaatcatggtgaga
tatcatgcaactctaccagaaggcccacaaatccaaacacctggaaattattggatgaac
catgaagccaagaaagaagcgattgcacatggacatccagagacatggaatgctgaaatt
tttgtacagacattaaaagaattagcttcaaatttaaactggaaagaggtcattctacaa
ttagaccacccagaatttattgtccctgacagacaaggattaagtcttctcttcacaatt
ttgcgactaggtcttcagagcgcaggctatccagctacaatatttcctgttgaatatcta
tgtcgaaaatgggcaaatctagaaggtcaaatgagtttgattactaatattctcaaacac
ccagatatatttagttttgcagatcatccattccatccagtatcaattgatctgttaaaa
tctccacccgaaactgataataaggaaatatcaacatggcgttgcctttacttggtagaa
cttttactatatgcagcagaacgtggctactacatgcaagtccaagaattattcaagttt
cctcttcaacactgccctgatattttactccttgcgctgttacaaataaacccgccagtg
actgtattcagacaggaaataataacaatgctcattccagtttttctcggcaatcatcct
aattcaggtataattttacaacacgcgtggcattcacagaatcctaatataaaacccata
attatgcacgctatggctgaatggtacttacgtggcgaaagcgatcaatcaaaactatct
aggatattggatgtcgctcaagatcttaaggccttgtccttgttgttgaatgtccaatca
attccatttgtcatagatttagcatgtttggcttctcgaagagaatatttgaaattggac
aaatggctcacagacaaaatacgagaccatggtgagactttcgtttcagcaatggttaaa
tttcttcagcgacgatgtccgcaagtactcggcaaagtgccagaagagcaactaccaaaa
gccgcgcagttgcccccagaaactattggcacaatgttggcatgcttgcaattatgtatt
cctaacgtacagcaagagctgcaggaagcgatttataatgtaatagccaattgtcagaca
ttgatattgagcaaagtaagaccaggtataccaggtattgcccgtccgcacacaagagta
ttagagacaccttttaatcctgctggtttaggtggacagctgttcactccacatgtggac
gctattgctaatttaacaccaaacgtcgccaatatgactttaggtgcaccagcaaataca
gcctttgccatgcctggcacactagggccattggttgcagcgccagcatcgccttcgaga
ctaatgggagcaggaccaaatagtccttttgcgatgatgcaaatgcagcataacccaaac
gtagctaatatgtcagctcttgctagaatgcctcctgtacccgcaatggacaaacctcgt
ttaccggatcctattcactttccagaaattatgcataatgtatccaaggaaatagaagat
gaagctaacagctattttcagagaatatataaccatcctccacatccaacactgtcgata
gatgaagtattagaaatgttgaagaagttccaagactcatcaaataaaagagaacgagaa
gtattttcttgtatgcttcgaaacctttttgaagaatataagtttttcccacagtacccg
gacaaagagctacatattacagcgcaattatttggtggtataatagaaaaaggtttagtt
cctagttacgtttccttagggctagctttaagatttgtcttagatgctttacgaaagccg
gagggctctaaaatgtactactttggtatagcggctctagatagattcaaatcccgttta
aaggactatcacaaatattgtgaacatgttcgagcaatacctcattttagtgaattccct
ccgcacttagtcgaatacatcgaatatggccttcagagccaagagccgcctactaaaccg
caaggagcagtgctgccagcaagtctagccgccatgctaaatcagagcgccgttgtaacc
gtttcggctccatacagggcagtcgtttgtgtacacaaccctatctcggttatatcgaag
gttacaaactgcgctgccggtggcatcggcagtagaccgtctatagctaatgctacaaat
attgacacactgcttactgctacggacagagatgaaaaaattaccgcgccaccggaagct
gttcaagataagactgcatttatattcaacaatctcagccagctaaacctgcaaactaaa
tgcgaagaattgaaagaaataataacggatgaatattatcaatggctttcgcagtatcta
gtaatgaagagagcttcgatcgagctaaatttccacgctctgtattctaattttctcgat
gtcttaaaaattcgtgaaataaataaaatggttacgaaagaaacttaccgaaatattaga
gtgttattgcgatctgacaaaggcatagcgaacttttctgaccgatctttattgaaaaat
ctcggtcattggttaggtatgctgaccttagctcgcaaccagccaatcctttatatagat
cttgatcttaaagcacttttacttgaagcttatcacaaaggccagcaggagcttctttat
gtcgtgccgtttgttgcgaaggtcttggaatcctgcgctaagagcatcgtattcagaccg
ccgaatccatggtcaatggctctaatgaacgtattggccgagttacatcaagaacctgat
ttgaaattgaatttaaagtttgaaatagaagtgctttgtaaaaacttaagtttagactta
accgatttaaaaccatcactatatttaaaggatccagaaaaattaagaactatcgaattc
caactttcacaacccaaaccaattaaagagccaactaatgtaatacccgttaatcaggcc
gtagttcaggtaccacaaattcaaatgatgcctcctcaaccaccaatgattcctatcgag
gaaatgtctggtgttgtacccacacccactagtggtatgattcccaatgatccgagcatg
atgggtgttttaggattgccggagcctagatttaactatcttgatgtgaacgtctcctca
acttcggctttcggtcagaaaataagtttcaatccgcatattattcttttccaaaattat
cctcatttaaaacaattcgtaaaacctgctatcgagagatcgattcaagaatggattcac
ccagttgtggatcgatcaatcaagtatgccttgacgacttgcgagcagattataaggaag
gactttgcttttgatcccgatgaagtgcgaatgcgtacgtgtgcgcaccatatgatgcgt
aatcttactgctggcatggctatgatcacttgccgcgagcagatcattagcacaataagc
actaacttgaaagctgcttttatcactgccctaataccaacaacgcctcaacagttgaat
gtgttacagaaggatatcatagaaagtgcagcagcagttcttgctacagaaaacatggag
ctcgcttgcgctttcattcaaaagactgccgttgaaaaggcattacctgaactcgataag
aggttagtgaacgactacgaaatgagaaaaatagcccgccaagaaggacgcagatactac
gaccccataatattgacttaccaaactgaacgcatacccgaaagggtgcgactgcgagtc
ggtggtcctacagacctccaaatttctgtttatgaagagtttgcgtgtaacatccctgga
tttatgccagtccgcgatgcgggaatgttcattcctaagccatcagcgcaggagcaaatg
ccgcagatgacattcagccaagtaatgaatccaacccaggtgtacggtaccgatgaaatg
ggaactcttataacaacagcggaattgttcctttccaatgcgctaacggttccgctattc
gcggtccaggcgaccaacactcatacattgctggaatgtcttatcatagcgagacgtaac
cgggatatcgtatctggctacacattattgcaacgagctgttgaaggtcttcttgatgga
catattgtccaacctgggacaaaccctgagcatgcagagatgatgactcgctaccgtgac
attcatcttcgagtcctcaagctgctggaagatgctagggtttacggtcacgcctggacc
accaaacaaataacatactgcgtaacagaatgtcgagatgagcttcgatataatctggaa
gctatagattgtctcatcagaaatcatctcatcaatttgccacaatacgatctttctctc
gcccatctgatggacaacgggaataactacttggccgtggcatttgcaatgcagttagtg
cagctctaccttgtcgacgataggaacaatttgtatgctactgaatcggacttgtatcac
actacggagactctcgtgaggatgatgtccaactccagacaaccgccgccagaaggccta
ggttctctcatcgaaacgattagaataaaccaggaccctagcacgtatcttggcgaacgt
tctccattgggacctactgcacatattcataatggaatcctgcaagtgagagctcgagat
tacgaagatccacccggtctccaagagaagactgaaaatctccttcgtgaatggaggaac
gtcctcttgagcccgctgacggaactcgagatcggacagaattttaacatttacgtccac
cgaatgaatatgaacggaatactcaagtcagatgacatgattacccgcttcttccgtatc
gcaacacagatgtgtgtcgagaatgtgtaccagttgctcacagaggacaggatgaacccg
ccgccagtgcctccgaagagggaaaagtactacgcgatatgcgactcctttatcaagctc
gtgtcattattaatcaagaatacggcggacggtggcaaccccacgccaaaacttaatttg
cttaataagattctaggcataatcgctggatgtctactccaggaccacgaagaacatggc
gccaacttccaacagcttccttaccatcgtctacttctcatactattccttgacatgaac
atggccgagccagtcttagaatcaattaactatcaggttctaacagcattctgccacacc
ctccgcataatccgtccgagcgtggcaccgggcttctgctatgcctggctcgagatcgtg
gcacacagggctttcgttaacagagtgttagccgtaacgccgcaacagaagggctgggga
atgtattcgacgctgcttatcgaccttttcaagttcctcgatccgttcctacgtaatacg
gaactggcgacgcccgttatgatgctatacaaaggaactctcaaagtcttactcgtttta
cttcacgattttcccgagtttctgtgtgactaccactatggcttttgtgatgagataccg
ccaaattgcatccaaatgaggaatctcatcctatcagccttcccgaggaacatgcggctg
cccgatcctttcacgccgaatttgaaagtggatctgttagccgaaatcactctaccgcct
cgcgcagttataaactacgctacgattattccgtcctcgcagtttaagaaggacttggac
gcatatatcaaggccagagcgcctgtcacgttcctttcggagctgcgtagtaacatgcag
gtggtgaatgagccaggccgcagatacaacagccaactgatgaacgccgtggtgctgtac
gtcggtactcaggctatcgctcatattagatcgaagggacagacgccaaacatgacaact
atagcccattcagcgcacatggatattttccaaaactttaccgtagactttgactacgaa
ggaaggtacctattcctgaacgcgattgcaaatcagctgcgctatccgaacagccacact
cattacttcagctgttgcctgctttacttgttcgcggaggcgaactctgaggccgttcaa
gaacagatcacaagaatgctgcttgagaggctgatagtgaaccgacctcacccgtgggga
ctgctgattacattcatcgaactaattaagaacccgatctacaagttttggagtcacgag
ttcgtacattgcgcgccggagattgaaaagcttccaagaggggcagcaaagagaggcgct
cccgcaaccgcaaccttccacttctcaacctgtaaaacacgtcttacaatggaacaaatt
attcaaaaagtaaattcaatactaaacccttgcccagaatcggcaccgccggaaggaacg
gacggtacaagtgaaaaagtggttagtgacagtgtgaatcaataa
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integrated database retrieval system
