Candidatus Nitrosopumilus sediminis: NSED_02115
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Entry
NSED_02115 CDS
T02303
Name
(GenBank) peptide chain release factor 1
KO
K03265
peptide chain release factor subunit 1
Organism
nir
Candidatus Nitrosopumilus sediminis
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NSED_02115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nir03019
]
NSED_02115
03012 Translation factors [BR:
nir03012
]
NSED_02115
Messenger RNA biogenesis [BR:
nir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
NSED_02115
Translation factors [BR:
nir03012
]
Eukaryotic type
Release factors
NSED_02115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
baeRF_family10
acVLRF1
eRF1_3
baeRF_family3
Peptidase_C3
Motif
Other DBs
NCBI-ProteinID:
AFS82233
UniProt:
K0B7W8
LinkDB
All DBs
Position
359257..360315
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AA seq
352 aa
AA seq
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MKTTLGPIEITPLEWISINQFLHEIKKIDSQCVSVYYPYGKGQDTISLLQETKRNETLER
IESKIENKIAELKKNPVSVGKFAKTLCIFGWIKNGKVDIKVIGTSKKLPYVYMASKKPFI
KPFNDILETNYDVLLVTLDQKSARIQKFHGSQIIQEAKLGIDLQGRHRKGGQSQGRFLRA
RQTKIHVFFKKVANKVKEMDSNSLLILLGGIGPAKTEFYDELNSELVKKCRFVENLSFST
SMKEINKKIIRHLYQHRRKYVTELIEKYETLVKDGLTAKRNDVIYKALEIGAVDTLIVSA
NYHTNSQFKKIMKMLEIAKNTSCKIEFAVSSKIIKKLDIDNSVLAILRYKIT
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaactcttgggcctatagagattaccccgcttgagtggatatcaattaaccaa
tttctacatgaaataaaaaagattgattctcaatgtgtatcagtgtattatccctatgga
aaggggcaagacacaatatcactactccaggaaacaaagcgaaacgaaactctggaaaga
atagagtcaaaaattgaaaacaaaattgctgaacttaaaaaaaatcctgtctctgtaggg
aaatttgccaaaacactgtgcatctttggatggataaaaaacggcaaagtcgatatcaaa
gttattggcacttcaaaaaaattgccatacgtctacatggcaagcaaaaagccatttatc
aaaccattcaatgatattttggaaactaattatgatgtcttactggtaacgctagatcaa
aaatctgcaagaattcaaaaatttcatggcagtcaaataattcaagaggctaagcttgga
attgatttgcaaggcaggcatcgcaaggggggacagagtcagggaaggttcctcagagca
agacaaaccaaaatccatgttttcttcaagaaggtggcaaacaaagtcaaagagatggat
tcgaattctttgctaattttattgggtggaattggacctgcaaaaaccgagttttatgat
gaactcaattcagaattggtaaaaaaatgccgatttgtagaaaacttgtccttttctaca
tctatgaaggagattaacaaaaaaataattcggcatttgtatcagcacagacgaaaatat
gttacagaactaattgaaaaatacgagactctagtcaaagatggactaactgctaaaaga
aatgatgtaatttacaaagcattagaaattggcgcagtagataccctaattgtttctgca
aattatcatacaaattcacaattcaagaaaataatgaagatgttagagattgcaaaaaat
acctcctgtaaaatagagtttgcagtttcctcaaaaataataaaaaaactagacattgac
aactctgtcctggccatacttcgatacaaaataacataa
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