Candidatus Nitrosopumilus sediminis: NSED_08340
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Entry
NSED_08340 CDS
T02303
Name
(GenBank) pyridoxal-5'-phosphate-dependent protein subunit beta
KO
K01738
cysteine synthase [EC:
2.5.1.47
]
Organism
nir
Candidatus Nitrosopumilus sediminis
Pathway
nir00270
Cysteine and methionine metabolism
nir00920
Sulfur metabolism
nir01100
Metabolic pathways
nir01110
Biosynthesis of secondary metabolites
nir01120
Microbial metabolism in diverse environments
nir01200
Carbon metabolism
nir01230
Biosynthesis of amino acids
nir01320
Sulfur cycle
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
NSED_08340
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
NSED_08340
Enzymes [BR:
nir01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.47 cysteine synthase
NSED_08340
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Gene cluster
GFIT
Motif
Pfam:
PALP
CARF_Card1
Mur_ligase_C
Tet_JBP
Motif
Other DBs
NCBI-ProteinID:
AFS83460
UniProt:
K0BEJ9
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Position
1395626..1397167
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AA seq
513 aa
AA seq
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MSENNFDKPLLEKFEREIWSKIPHLEDGKVVNATPLIDLTRDLKECAKNLYKLDISDLDL
KVYGKFDSNLVSGSIKIRPAIHIMHDAIKTGKLKSNQTIIEATSGNFGIALGQMSKLGLT
VVSLVSRKLQEGVFKELRNENIRIMDLDMDICPAPGMKDSEADALVAKATAANIRSQLIE
LGFDPTNYDNSISEVESLLAAQDIINLAKLLSKIYDCFCPEQYDNELNIDAHRTITAVEI
EQQLQEKGDSLEDYRIICSFGTGGTSGGLSRYMNEKYDKKAIHVVFPAPGQDVAGIRTKA
KADGLKLYNPEAYAAEHEVDFGQARHLLKFFVDKGHNIGESTALAMYAILEMLSEGEKGK
FIVVVADGIEKYRKNLESASSNQRIQVSLEDAASSVQDYDKIIWVHTQYTPKEEGIEMIA
KSLGVNKEKIVIPKASTINQLLSTQQIPDELNKDLDGSKGKSLLICMAGNTSLMTAQVLA
SKGIVTESLNGGITNLPEGRGKNPGEFIKAATD
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaataattttgataaaccattacttgaaaaatttgaacgtgaaatttggagt
aaaattccacatttagaagatggaaaagtggtcaatgcaacgccattgattgatttaact
agggatcttaaagaatgtgcaaaaaatctttacaaactagatatttcagatttggatcta
aaagtgtatggaaaatttgattctaatttggtgtcaggttcaatcaaaattagaccagca
attcacataatgcatgacgcaattaaaaccgggaagttaaaaagtaatcagacaataatt
gaggcaacatcaggaaattttggaatagctcttggacaaatgtcaaaacttggattaact
gtggtttcacttgtttcaagaaaattgcaagaaggagtcttcaaggaattgagaaatgag
aatattcgtataatggatttggatatggatatttgtcctgctcctggaatgaaagatagt
gaggctgatgcactagttgcaaaggcaactgcagcaaacattcgttctcagttaattgaa
ttaggttttgatccaacaaattacgataattcgatttcagaggttgaatcgttgttggca
gcacaagacattatcaatttggcaaaattactttcaaaaatttatgattgtttttgtcca
gaacaatacgataatgaattaaacattgatgctcatagaacaattacagctgtagagatt
gaacagcagttacaggaaaaaggggattcattagaagattatagaataatttgttcattt
ggaacaggtggtacatcaggaggattaagtagatacatgaatgaaaagtatgacaaaaag
gcaatacatgtagtatttccagctccaggtcaagatgttgcaggaatcagaacaaaggct
aaagcagatgggctaaagttgtacaatccagaagcatatgctgctgagcacgaagttgat
tttggacaggcaagacatttactaaaattctttgtagacaaaggtcataatattggcgaa
agtactgcacttgccatgtatgccatattagaaatgctaagtgagggagaaaaaggaaaa
ttcattgttgtagttgctgacggtatagaaaagtatagaaaaaatctagaatcagcatca
tctaaccagcgtattcaagtttcattagaagatgcagcatcaagtgttcaagattacgat
aaaataatctgggttcatacacaatatacgccaaaagaagaaggaattgaaatgattgct
aaatccttaggtgtaaataaagaaaaaattgtgataccaaaagcaagcaccattaatcaa
ttattatctacacagcaaattccagatgagcttaacaaagatctggacggctctaaaggt
aaatcattactaatttgcatggctggaaatacatcattaatgactgcccaagtacttgca
agtaagggcattgtaactgaaagcttgaatgggggaataacaaatttgcctgaaggcaga
ggcaaaaatccaggcgaatttatcaaagctgcaactgattaa
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