Nitratiruptor sp. SB155-2: NIS_1364
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Entry
NIS_1364 CDS
T00565
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
nis
Nitratiruptor sp. SB155-2
Pathway
nis00540
Lipopolysaccharide biosynthesis
nis01100
Metabolic pathways
nis01250
Biosynthesis of nucleotide sugars
Module
nis_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
nis00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
NIS_1364 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
nis01005
]
NIS_1364 (kdsA)
Enzymes [BR:
nis01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
NIS_1364 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
nis01005
]
Lipid A
NIS_1364 (kdsA)
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
DUF3657
Motif
Other DBs
NCBI-ProteinID:
BAF70472
UniProt:
A6Q4R3
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Position
complement(1378263..1379063)
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AA seq
266 aa
AA seq
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MILIAGPCVIESQEQLEIIASDLKRYHKSDEIDFYFKASFDKANRTSLDSYRGPGLEKGL
EMLAKIKEDFGYKILTDVHESYQVEAVAEVADVIQIPAFLCRQTDLLVAAATTERIVNIK
KGQFMHPEDMKYSVLKVLKTRGVETADYETSQKAGVWLTERGTSFGYRNLVVDMRSLVIM
REFAPVIFDATHAVQMPGGAGGKSSGNKEFVAPLSRAVAAVGVDGFFFETHYDPSCALSD
GPNMVTPSELEAIVDDIFKIERALHV
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgattttaatagcgggaccgtgcgttatagagagtcaagagcaactcgaaattatcgca
tccgatctgaagcgataccataagtctgacgaaatcgatttttattttaaagccagtttt
gacaaggctaacagaacaagtcttgatagttacagaggtcctggtcttgaaaaaggcctt
gaaatgctggccaaaatcaaagaggattttggatacaagatcctcacagatgtccatgag
agctatcaggttgaagcagttgctgaggtggctgacgttatccagattccagctttcttg
tgccgtcaaacggatctattggtggctgcagcgacaacagaaagaatcgtcaatatcaaa
aaggggcagttcatgcaccctgaagatatgaaatacagcgtcttgaaagtccttaaaaca
agaggggtagaaactgctgattatgaaacgagccaaaaagcaggcgtatggttgactgag
agaggaacgagttttggatatagaaatttggtggtagatatgcgaagtttggtcatcatg
agagagttcgctccagtgattttcgatgcgacccacgctgtgcagatgccaggaggggca
ggtggcaaaagtagcggtaacaaagagtttgtcgctccactttcccgagcagtagctgca
gtgggcgtagatggatttttctttgagacccattacgatccaagctgtgctttaagtgat
ggaccgaatatggtaacgccaagtgagcttgaagcaatagtagatgatattttcaaaata
gaaagagcattgcatgtttga
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